Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I12
         (1218 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    27   0.84 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   5.9  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    24   7.8  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 588 ARLAAMSEKEREQEIFKRIERRDLMKTRWEI 680
           ARL +  E +REQE+ +R+E +   + R ++
Sbjct: 156 ARLESQQELQREQELLRRMESQQRQEQRQQL 186


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 558 ENLMGDEEDRARLAAMSEKEREQEIFKRIERRDLMK 665
           E  + D+ED       +E  + QEI K  E+ +LMK
Sbjct: 849 ERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMK 884


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +3

Query: 576 EEDRARLA--AMSEKEREQEIFKRIERRDLMKTRWE 677
           EE+RAR A  A  E+E+E+E+ ++ ER    K + E
Sbjct: 454 EEERAREAREAAIEREKERELREQREREQREKEQRE 489


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 555 DENLMGDEEDRARLAAMSEKEREQEI 632
           +E+   DE + ARL A   +ER+QE+
Sbjct: 101 EESEESDELEEARLVAEELEERQQEL 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,704
Number of Sequences: 2352
Number of extensions: 9075
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138565233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)