Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I11
         (1244 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   227   2e-59
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   227   2e-59
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   139   6e-33
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   139   6e-33
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...    65   2e-10
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    37   0.066
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    37   0.066

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  227 bits (556), Expect = 2e-59
 Identities = 112/151 (74%), Positives = 121/151 (80%)
 Frame = +1

Query: 178 IGASGLRNKRXVWRVKSTXXXXXXXXXXXXXXEXQAPKRLFEGNALLRRLVRIGVLDXKQ 357
           IG  GLRNKR VWRVK                + +  KRLF+GNALLRRLVRIGVLD  +
Sbjct: 33  IGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

Query: 358 LXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIRVRKQVVNIPSFIVRL 537
           + LDYVLGLK+EDFLERRLQ QVFK GLAKSIHHA +LIRQRHIRVRKQVVNIPSF+VRL
Sbjct: 93  MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRL 152

Query: 538 DSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 630
           DS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 153 DSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  227 bits (556), Expect = 2e-59
 Identities = 112/151 (74%), Positives = 121/151 (80%)
 Frame = +1

Query: 178 IGASGLRNKRXVWRVKSTXXXXXXXXXXXXXXEXQAPKRLFEGNALLRRLVRIGVLDXKQ 357
           IG  GLRNKR VWRVK                + +  KRLF+GNALLRRLVRIGVLD  +
Sbjct: 33  IGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

Query: 358 LXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIRVRKQVVNIPSFIVRL 537
           + LDYVLGLK+EDFLERRLQ QVFK GLAKSIHHA +LIRQRHIRVRKQVVNIPSF+VRL
Sbjct: 93  MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRL 152

Query: 538 DSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 630
           DS KHIDFSLKSPFGGGRPGRVKRKNL+K Q
Sbjct: 153 DSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  139 bits (337), Expect = 6e-33
 Identities = 70/105 (66%), Positives = 77/105 (73%)
 Frame = +1

Query: 178 IGASGLRNKRXVWRVKSTXXXXXXXXXXXXXXEXQAPKRLFEGNALLRRLVRIGVLDXKQ 357
           IG  GLRNKR VWRVK                + +  KRLF+GNALLRRLVRIGVLD  +
Sbjct: 33  IGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

Query: 358 LXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIR 492
           + LDYVLGLK+EDFLERRLQ QVFK GLAKSIHHA +LIRQRHIR
Sbjct: 93  MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  139 bits (337), Expect = 6e-33
 Identities = 70/105 (66%), Positives = 77/105 (73%)
 Frame = +1

Query: 178 IGASGLRNKRXVWRVKSTXXXXXXXXXXXXXXEXQAPKRLFEGNALLRRLVRIGVLDXKQ 357
           IG  GLRNKR VWRVK                + +  KRLF+GNALLRRLVRIGVLD  +
Sbjct: 33  IGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92

Query: 358 LXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIR 492
           + LDYVLGLK+EDFLERRLQ QVFK GLAKSIHHA +LIRQRHIR
Sbjct: 93  MKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
 Frame = +1

Query: 178 IGASGLRNKRXVWRVKSTXXXXXXXXXXXXXXEXQAPKRLFEGNALLRRLVRIGVLDXKQ 357
           IG  GL+  R V  VK                + +  KRLF+G +L+RRLVRIGVL    
Sbjct: 33  IGEYGLQQARSV-AVKYALAKIRKVARELLTLDEKDAKRLFQGKSLVRRLVRIGVLKSPH 91

Query: 358 LXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIRVRKQVVNIPSFIVRL 537
                  G +    L         +AGLAKSIHHA +LIRQR   +  +   IPSF+V  
Sbjct: 92  -EARLRAGSEDSGLLGASSADAGVQAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTP 150

Query: 538 DSGKHI-DFSLKSPFGGGRPGRVKRK 612
              +   +FSLK P    RP R +++
Sbjct: 151 GLPEATSNFSLKMPL-RTRPSRSRQE 175


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 36.7 bits (81), Expect = 0.066
 Identities = 22/73 (30%), Positives = 38/73 (52%)
 Frame = +1

Query: 313 LLRRLVRIGVLDXKQLXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIR 492
           LL +L  +GV +  QL L+    +    F  RRL   + K  +++ +  A  LI   H+R
Sbjct: 78  LLNKLHAMGVSND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136

Query: 493 VRKQVVNIPSFIV 531
           V  +++  P+F+V
Sbjct: 137 VGPEMIKDPAFLV 149


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 36.7 bits (81), Expect = 0.066
 Identities = 22/73 (30%), Positives = 38/73 (52%)
 Frame = +1

Query: 313 LLRRLVRIGVLDXKQLXLDYVLGLKLEDFLERRLQXQVFKAGLAKSIHHAXILIRQRHIR 492
           LL +L  +GV +  QL L+    +    F  RRL   + K  +++ +  A  LI   H+R
Sbjct: 78  LLNKLHAMGVSND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136

Query: 493 VRKQVVNIPSFIV 531
           V  +++  P+F+V
Sbjct: 137 VGPEMIKDPAFLV 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,210,584
Number of Sequences: 53049
Number of extensions: 442549
Number of successful extensions: 905
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6662005335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)