Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I08
(1191 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 314 1e-86
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 152 1e-37
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 132 7e-32
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 129 9e-31
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 127 3e-30
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 106 5e-24
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 101 3e-22
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 79 2e-15
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 2e-07
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 29 0.96
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 5.1
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 27 6.8
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 26 9.0
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 314 bits (772), Expect = 1e-86
Identities = 173/308 (56%), Positives = 214/308 (69%), Gaps = 4/308 (1%)
Frame = +1
Query: 148 VSLNPIRXLKNXXXXXXXXXXRMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVE 327
+SLNP + R+SSF+GAIA+G LVK LGPKGMDK+L S +SG +
Sbjct: 1 MSLNPHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQS--NSSGDIV 58
Query: 328 VTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLH 507
VTNDGATILKSI +DN AAK+LV++SKVQD+EVGDGTTSV V ++ K+H
Sbjct: 59 VTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIH 118
Query: 508 PQTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFT 687
PQ II G+RIA+ A AL +S D+ + A R DLENIARTTLSSKILS +K HF
Sbjct: 119 PQVIIDGYRIATKTAIDALRASSIDNSSD--PAKFRSDLENIARTTLSSKILSQNKNHFA 176
Query: 688 KLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIA 867
+LAVDAVLRLKGS NL IQIIKI GG L++SFLDEGF+LNK +GV+ PK +ENANILIA
Sbjct: 177 QLAVDAVLRLKGSTNLDNIQIIKILGGKLDDSFLDEGFILNKTIGVNCPKVMENANILIA 236
Query: 868 NTPMDTDKIKVFGSTIKVDSMAKMAELEVAXKXK*RTS-EQDLAHNV-CLHXRHLXHY-- 1035
NT MDTDK+KVFG+ ++VD+ K+AELE A + K + E+ +HN+ C R L +
Sbjct: 237 NTAMDTDKVKVFGARVRVDTTGKLAELERAEREKMKAKVEKIKSHNINCFINRQLIYNWP 296
Query: 1036 XXXVADAG 1059
ADAG
Sbjct: 297 EQLFADAG 304
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 152 bits (368), Expect = 1e-37
Identities = 97/260 (37%), Positives = 150/260 (57%), Gaps = 12/260 (4%)
Frame = +1
Query: 211 RMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 390
R + + AI +VK LGP G+DK+LV + G V VTNDGATIL + V++PA K+
Sbjct: 23 RNQNVLATTAIANVVKSSLGPVGLDKMLVD---DIGDVTVTNDGATILSLLDVEHPAGKV 79
Query: 391 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 570
LV++++ QD+EVGDGTTSV + +L++ K+HP TII G+R+A A + + +
Sbjct: 80 LVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTD 139
Query: 571 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN------ 732
+L + S L N+A+T++SSKI+ N + F+ +AVDA+L +K S +
Sbjct: 140 VLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRY 195
Query: 733 -LKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPK-KVENANILIANTPMDTDKIKV-F 903
+KA+ I+K G ES L +G+ LN + K +V+NA I + + MD K K+
Sbjct: 196 PVKAVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLD--MDLQKTKMAL 253
Query: 904 GSTIKV---DSMAKMAELEV 954
G + + D + K+ E EV
Sbjct: 254 GVHVTIDDPDQLEKIREREV 273
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 132 bits (320), Expect = 7e-32
Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 5/262 (1%)
Frame = +1
Query: 160 PIRXLKNXXXXXXXXXXRMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTND 339
P+ LK +S+ +A+ ++ LGP G DKL+V + G+V ++ND
Sbjct: 9 PVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVD---DRGEVVISND 65
Query: 340 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 519
GATI+K + + +PAAK LVD+++ QD EVGDGTTSV V +E + I
Sbjct: 66 GATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLI 125
Query: 520 IAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAV 699
I G+R A+ A + E + H +E LR L A T ++SK++ ++ FTK+ V
Sbjct: 126 IRGYRKAAQLAVNKIKEIAI-HLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVV 184
Query: 700 DAVLRLKGSG-NLKAIQIIKISGGLLEESFLDEGFLLNKKVGV----HQPKKVENANILI 864
DAVL L N I I K+ GG +E+S L +G K QPK +N IL
Sbjct: 185 DAVLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILC 244
Query: 865 ANTPMDTDKIKVFGSTIKVDSM 930
+ ++ K + + ++VD +
Sbjct: 245 LDVELEL-KAEKDNAEVRVDKV 265
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 129 bits (311), Expect = 9e-31
Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 7/234 (2%)
Frame = +1
Query: 211 RMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 390
R+S+ + A ++ ++ LGPKGMDK++ + G+V +TNDGATILK + V +PAAK+
Sbjct: 21 RLSNIMAARSVADAIRTSLGPKGMDKMIQT---GKGEVILTNDGATILKHLSVLHPAAKM 77
Query: 391 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 570
LVD+S QD E GDGTTSV + KL+++ +HP I ++ A+ + E
Sbjct: 78 LVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKE 137
Query: 571 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVL-----RLKGSGNL 735
+ + + E+ LR A T+L+SKI+S + +AVDAVL R+ + +L
Sbjct: 138 NALAIELSDRESLLRA-----ATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDL 192
Query: 736 KAIQIIKISGGLLEESFLDEGFLLNKKV--GVHQPKKVENANILIANTPMDTDK 891
K I+I+K GG+++++ L G L + P ++E ANI + + K
Sbjct: 193 KDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPK 246
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 127 bits (307), Expect = 3e-30
Identities = 85/256 (33%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Frame = +1
Query: 217 SSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILV 396
S + + +V+ LGP+G+DK+L+S G++ VTNDGATIL + V++ AK+LV
Sbjct: 38 SHILATKTVANIVRTSLGPRGLDKILIS---PDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 397 DMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEAS 576
+SK QD+E+GDGTT V V LI++ +HP I G+ A A + L +A
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHL-DAI 153
Query: 577 FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKA-IQII 753
D E + +L A+T+L SK++S +HF +AVDAVL + ++I
Sbjct: 154 SDVVDFSPENT--TNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELI 211
Query: 754 KIS---GGLLEESFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGSTIKV 921
K+ GG ++++ L +G +++K + Q P ++ENA I I P + K K + +
Sbjct: 212 KVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKT-KHKLDI 270
Query: 922 DSMAKMAELEVAXKXK 969
S+++ L+ K K
Sbjct: 271 TSVSEFEALQAYEKEK 286
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 106 bits (255), Expect = 5e-24
Identities = 68/235 (28%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Frame = +1
Query: 211 RMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 390
+MS+ A A+ +++ LGP+ M K+L+ G V +TNDG IL+ I V +PAAK
Sbjct: 21 QMSNIQAAKAVADVIRTCLGPRAMLKMLLD---PVGSVLLTNDGHAILREIEVAHPAAKS 77
Query: 391 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 570
++++++ QDEEVGDGTTSV + L+++K+HP +I ++ A + A + E
Sbjct: 78 MIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDE 137
Query: 571 ASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN------ 732
+ N+++ ++ + RT + +K+++ + LA+ AV + + N
Sbjct: 138 ITL--PVNVDD---NAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSNGRMEID 192
Query: 733 -LKAIQIIKISGGLLEESFLDEGFLLNKKV-GVHQPKKVENANILIANTPMDTDK 891
+ ++ K+ GG +E S + +G +LNK V +++EN I++ + P++ K
Sbjct: 193 IKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRK 247
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 101 bits (241), Expect = 3e-22
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 4/227 (1%)
Frame = +1
Query: 232 AIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKV 411
AI + ++K LGP G K+LV +G +++T DG +L + + NP A + +
Sbjct: 25 AIGLQDVLKSNLGPTGTTKMLVD---GAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATA 81
Query: 412 QDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQK 591
QD+ GDGTTSV + I + LHP I G+ +A + A L D +
Sbjct: 82 QDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEV 141
Query: 592 NLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSG---NLKAIQIIKIS 762
+ R L N+A+T+LS+KI S E VDA+L ++ +L ++I+K+
Sbjct: 142 D------REVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQ 195
Query: 763 GGLLEESFLDEGFLLNKKV-GVHQPKKVENANILIANTPMDTDKIKV 900
++ L G LL+ PK+V+NA ILI N ++ +K ++
Sbjct: 196 NRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILNVSLEYEKSEI 242
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 78.6 bits (185), Expect = 2e-15
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 4/229 (1%)
Frame = +1
Query: 241 IGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDE 420
+ + + LGP G +K++V+ + Q +TND ATI++ + V +PAAK++VD ++ Q+
Sbjct: 38 LSEITRTSLGPNGKNKIVVN---HLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQEN 94
Query: 421 EVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASFDHQKNLN 600
E+GD V V +I L P I G+ +A + L E D +
Sbjct: 95 ELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD---KIE 151
Query: 601 EASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGNLKAIQIIKISGG 768
+L RT +SSK N ++ + L A+L + N+ I+++KI G
Sbjct: 152 TVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVDNIRVVKIMGS 210
Query: 769 LLEESFLDEGFLLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTI 915
L S + +G + ++ + E A + + + P+D + + G+ +
Sbjct: 211 SLYNSQVVKGMVFPREPEGTVTRSKE-AKVAVFSCPLDISQTETKGTVL 258
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 51.6 bits (118), Expect = 2e-07
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Frame = +1
Query: 211 RMSSFIGAIAIGALVKXXLGPKGMDKLLVSCGRNSGQVEVTNDGATILKSIGV----DNP 378
R S G + V LGPKG + L+ + G ++T DG T+ +S+ + +N
Sbjct: 44 RASLLTGVDTLARAVSVTLGPKGRNVLI---DQPFGSPKITKDGVTVARSVSLKDKFENL 100
Query: 379 AAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQ 558
A+++ D++ +E GDGTT+ TV + + +P + G ++A D +
Sbjct: 101 GARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVE 160
Query: 559 ALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLK 738
L Q N + + ++ +A T+S +N H +L A+ R+ G +
Sbjct: 161 FL-------QANKRDITTSEEISQVA--TIS----ANGDTHIGELLAKAMERVGKEGVIT 207
Query: 739 AIQIIKISGGL--LEESFLDEGFLLNKKVGVHQPKKVENANILI 864
+ IS L E D G++ + + +KVE N LI
Sbjct: 208 VKEGRTISDELEVTEGMKFDRGYISPYFITDVKSQKVEFENPLI 251
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 29.5 bits (63), Expect = 0.96
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 610 LRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 756
L V E++ LS LS +K T ++ +LR GS LKAI ++K
Sbjct: 518 LPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGTGSQPLKAIGLLK 566
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 802 LLNKKVGVHQPKKVENANILIANTPMDTDKIKVFGST 912
L N P K E N++ AN + DK + FGS+
Sbjct: 108 LYNHMSSAPSPNKKEETNVVHANEDISLDKRQSFGSS 144
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 365 PIDFNIVAPSFVTST*PEFLPQETKSLSXP 276
P+D ++ +P TST PE LP+E S S P
Sbjct: 408 PLDGDVESPH-PTSTMPEALPREPLSFSLP 436
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 851 LTSLLQTHQWTLTRLKCLVPQLKWIQWPRWLNWK 952
LT L+ + +T R V ++ + +W W+ W+
Sbjct: 267 LTEGLRVYDFTFERKYTKVERIAYSRWMNWIKWE 300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,903,651
Number of Sequences: 5004
Number of extensions: 71256
Number of successful extensions: 196
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 641482604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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