Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I06
(1223 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 36 0.23
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 36 0.23
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 36 0.23
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 36 0.23
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 36 0.23
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 36 0.23
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 36 0.23
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 36 0.23
BC036035-1|AAH36035.1| 979|Homo sapiens DHX36 protein protein. 33 1.6
AJ577134-1|CAE11803.1| 994|Homo sapiens putative DExH/D RNA hel... 33 1.6
AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA hel... 33 1.6
AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein. 33 1.6
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 44 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 78
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 36.3 bits (80), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHLGXXAXXGXXGKR 483
G GG GG GGG GG G H G G GKR
Sbjct: 41 GRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKR 75
>BC036035-1|AAH36035.1| 979|Homo sapiens DHX36 protein protein.
Length = 979
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHL 447
G GG GG GGG GG R GHL
Sbjct: 35 GSGGGGGGGGGGRGGRGRHPGHL 57
>AJ577134-1|CAE11803.1| 994|Homo sapiens putative DExH/D RNA
helicase protein.
Length = 994
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHL 447
G GG GG GGG GG R GHL
Sbjct: 35 GSGGGGGGGGGGRGGRGRHPGHL 57
>AJ577133-1|CAE11802.1| 1008|Homo sapiens putative DExH/D RNA
helicase protein.
Length = 1008
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHL 447
G GG GG GGG GG R GHL
Sbjct: 35 GSGGGGGGGGGGRGGRGRHPGHL 57
>AF217190-1|AAG36783.1| 1008|Homo sapiens MLEL1 protein protein.
Length = 1008
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 379 GXGGXGGXXGGGXGGXXRGXGHL 447
G GG GG GGG GG R GHL
Sbjct: 35 GSGGGGGGGGGGRGGRGRHPGHL 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.142 0.461
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,398,682
Number of Sequences: 237096
Number of extensions: 805385
Number of successful extensions: 5668
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4569
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17339562450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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