Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I05
(1257 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7JWG9 Cluster: 39S ribosomal protein L52, mitochondria... 73 2e-11
UniRef50_Q1HQF0 Cluster: Mitochondrial ribosomal protein L52; n=... 52 3e-05
UniRef50_Q7Q945 Cluster: ENSANGP00000013209; n=1; Anopheles gamb... 51 7e-05
UniRef50_Q56FJ0 Cluster: Putative mitochondrial ribosomal protei... 50 1e-04
UniRef50_Q86TS9 Cluster: 39S ribosomal protein L52, mitochondria... 48 5e-04
UniRef50_Q4V7Q1 Cluster: 39S ribosomal protein L52, mitochondria... 46 0.002
UniRef50_Q4S0T4 Cluster: Chromosome undetermined SCAF14779, whol... 45 0.005
UniRef50_UPI00015B51FE Cluster: PREDICTED: similar to putative m... 43 0.019
UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|R... 39 0.24
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA... 39 0.31
UniRef50_UPI0000DB6D3F Cluster: PREDICTED: hypothetical protein;... 39 0.31
UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2; ... 39 0.31
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap... 39 0.31
UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli... 37 1.3
UniRef50_Q9M7Y1 Cluster: F3E22.11 protein; n=1; Arabidopsis thal... 36 1.7
UniRef50_A2DLA9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_A4T9C9 Cluster: Integral membrane protein-like protein;... 36 2.2
UniRef50_A2DC30 Cluster: Formin Homology 2 Domain containing pro... 35 3.8
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian... 35 5.1
UniRef50_A2DM28 Cluster: Diaphanous, putative; n=1; Trichomonas ... 35 5.1
UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella ve... 34 6.7
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M... 34 6.7
UniRef50_A6APN4 Cluster: Insecticidal toxin, SepC/Tcc class; n=2... 29 7.6
>UniRef50_Q7JWG9 Cluster: 39S ribosomal protein L52, mitochondrial
precursor; n=2; Sophophora|Rep: 39S ribosomal protein
L52, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 126
Score = 72.5 bits (170), Expect = 2e-11
Identities = 37/88 (42%), Positives = 47/88 (53%)
Frame = +1
Query: 214 KNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSEL 393
+ WR A+GLP N NA G LT+ PDYT+LDGRPTP A +IV LS EL
Sbjct: 31 QKWRAAKGLPENPNAFGPLTNLPDYTYLDGRPTPLGANQKRRLIKQQEIATRIVELSGEL 90
Query: 394 QFAKDRYXXXXXXXXXXXXXXLNNRLKP 477
+FAK R+ + ++LKP
Sbjct: 91 EFAKQRHERLKANAESEKQRLIRSKLKP 118
>UniRef50_Q1HQF0 Cluster: Mitochondrial ribosomal protein L52; n=1;
Aedes aegypti|Rep: Mitochondrial ribosomal protein L52 -
Aedes aegypti (Yellowfever mosquito)
Length = 129
Score = 52.0 bits (119), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = +1
Query: 247 NRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSELQFAKDRYXXXX 426
N N G LTD PDY+FL+GR TP A +IVT+S E+ +A +RY
Sbjct: 45 NPNKSGPLTDLPDYSFLNGRVTPLGARQTKRLLQQQEIANKIVTMSKEMDYAVERYKSLQ 104
Query: 427 XXXXXXXXXXLNNRLKP 477
++N LKP
Sbjct: 105 EEKQNRNKKIVSNYLKP 121
>UniRef50_Q7Q945 Cluster: ENSANGP00000013209; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000013209 - Anopheles gambiae
str. PEST
Length = 89
Score = 50.8 bits (116), Expect = 7e-05
Identities = 28/77 (36%), Positives = 36/77 (46%)
Frame = +1
Query: 247 NRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSELQFAKDRYXXXX 426
N N +LT PDYT++DGR TP A+QIVTLS E+ FA +R+
Sbjct: 4 NPNKSSLLTHLPDYTYMDGRVTPFGANQRKRIIQQREIAKQIVTLSKEMDFAVERHQRNM 63
Query: 427 XXXXXXXXXXLNNRLKP 477
L +LKP
Sbjct: 64 TEAEETKQKLLAAKLKP 80
>UniRef50_Q56FJ0 Cluster: Putative mitochondrial ribosomal protein
L52; n=1; Lysiphlebus testaceipes|Rep: Putative
mitochondrial ribosomal protein L52 - Lysiphlebus
testaceipes (Greenbugs aphid parastoid)
Length = 134
Score = 50.0 bits (114), Expect = 1e-04
Identities = 28/96 (29%), Positives = 42/96 (43%)
Frame = +1
Query: 190 SSCSALFTKNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQ 369
++C + + WR + L N N G LT+ PDY+F DGRP P +Q
Sbjct: 25 TTCISQIDQEWRREQRLTRNPNRFGPLTNLPDYSFADGRPVPFGVRQFTRIKKQREYLDQ 84
Query: 370 IVTLSSELQFAKDRYXXXXXXXXXXXXXXLNNRLKP 477
I L+ E+ +A R+ LN++ KP
Sbjct: 85 IKKLTGEVDYAVMRHAKMQKKIEENKQKILNSKFKP 120
>UniRef50_Q86TS9 Cluster: 39S ribosomal protein L52, mitochondrial
precursor; n=18; Theria|Rep: 39S ribosomal protein L52,
mitochondrial precursor - Homo sapiens (Human)
Length = 123
Score = 48.0 bits (109), Expect = 5e-04
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 172 TGLRRFS-SCSALFTKNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXX 348
TG+RR S +A WR+ +GL N + G LT+ PD+++ DGRP P
Sbjct: 10 TGVRRLHCSVAAWAGGQWRLQQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAE 69
Query: 349 XXXXAEQIVTLSSEL 393
A ++V LS E+
Sbjct: 70 RETFARRVVLLSQEM 84
>UniRef50_Q4V7Q1 Cluster: 39S ribosomal protein L52, mitochondrial
precursor; n=2; Xenopus|Rep: 39S ribosomal protein L52,
mitochondrial precursor - Xenopus laevis (African clawed
frog)
Length = 145
Score = 46.4 bits (105), Expect = 0.002
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +1
Query: 82 LVFIFPFKYTSKQ*NQRMNNLTGNKILKTITGLRRF-SSCSALFTKNWRVARGLPVNRNA 258
L++ P Y S + + N + + TG R SS ++WRV RG + +
Sbjct: 3 LLYCCPGFYLSSSVTRLLCVRLRNSVDLSRTGNRSVHSSTLRCAGQDWRVRRGFARSGSE 62
Query: 259 EGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSEL 393
G LTD PD++F DGRP P A ++V LS+E+
Sbjct: 63 YGPLTDLPDWSFADGRPAPPWKGQIRRKEEREALARRVVLLSTEM 107
>UniRef50_Q4S0T4 Cluster: Chromosome undetermined SCAF14779, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF14779, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 122
Score = 44.8 bits (101), Expect = 0.005
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 181 RRFSS-CSALFTKNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXX 357
++FS+ C+A + WR GL G LTD PD+++ DGRP P
Sbjct: 18 KQFSTTCAAPIGEKWRKEHGLARTGTEYGPLTDLPDWSYADGRPAPPMKGYLRRRQQNEV 77
Query: 358 XAEQIVTLSSEL 393
A +IV LS E+
Sbjct: 78 LARRIVMLSEEV 89
>UniRef50_UPI00015B51FE Cluster: PREDICTED: similar to putative
mitochondrial ribosomal protein L52; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to putative
mitochondrial ribosomal protein L52 - Nasonia
vitripennis
Length = 136
Score = 42.7 bits (96), Expect = 0.019
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +1
Query: 178 LRRFS-SCSALFTKNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXX 354
LR F S + WR R LP N N+ G LT+ PDY+F D RP P
Sbjct: 20 LRDFHVSTATCLNHKWRKERKLPSNPNSFGPLTNLPDYSFQDNRPVPYGTNQKKRIDQQR 79
Query: 355 XXAEQIVTLSSELQFAKDRYXXXXXXXXXXXXXXLNNRLK 474
+I L+ ++ A R+ L+++LK
Sbjct: 80 EQFIKIKELTGQIDHAVKRHALLERQEEERRKQILDSKLK 119
>UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|Rep:
Diaphanous homologue - Gallus gallus (Chicken)
Length = 1253
Score = 39.1 bits (87), Expect = 0.24
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +2
Query: 986 GXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
G P PPP G P P P P G P P GG PP GG
Sbjct: 696 GTVIPPPPPLPGGAAAVLPPPPPLPGGTIPPPPPLFGGAVPPPPPLPGGGAGPPPPPPGG 755
Query: 1166 XP 1171
P
Sbjct: 756 PP 757
>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to CG33556-PA - Strongylocentrotus purpuratus
Length = 1472
Score = 38.7 bits (86), Expect = 0.31
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGGXP 1171
P PPP G G P P P P G PP GG PP GG P
Sbjct: 455 PPPPPPGMGGAPPPPPPPPFPGGVPPPPPLPGGAPPPPPPPPFPGGGVPPPPFPGGGP 512
>UniRef50_UPI0000DB6D3F Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 95
Score = 38.7 bits (86), Expect = 0.31
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +1
Query: 232 RGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSELQFAKDR 411
+GL N N +L + DY+F + +P P ++I+ L E+ +A +R
Sbjct: 5 KGLSANPNNNSLLMNSSDYSFKNNKPVPYGLGQFKRIKKHQDFMKRIIKLVDEIDYAVER 64
Query: 412 YXXXXXXXXXXXXXXLNNRLKP 477
+ L +RLKP
Sbjct: 65 HANLIKEKKIQEQKILESRLKP 86
>UniRef50_A0R2X6 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 377
Score = 38.7 bits (86), Expect = 0.31
Identities = 24/69 (34%), Positives = 24/69 (34%)
Frame = -1
Query: 1164 PPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPXGGGXGXXXP 985
PP GG P PP GG P P G G G P P GG P
Sbjct: 11 PPPDGGYPPPPPPDGG---YPPPPPPDGGYPPAQPGGFGPPPQGGYPPPPPPGGY-PPPP 66
Query: 984 XKXXPPPPP 958
PPPPP
Sbjct: 67 QGGFPPPPP 75
>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 757
Score = 38.7 bits (86), Expect = 0.31
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GGGGG G PP G G P P G G PP GG
Sbjct: 398 GGGGGGGPPGGGGGGPPGSGGGGGGGGGPPEGG--GGSDGAPGRGGGGGGGGGPPGGGGG 455
Query: 1139 XGXPPXXGGXP 1171
G PP GG P
Sbjct: 456 GGGPPGGGGDP 466
>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
discoideum|Rep: Actin-binding protein - Dictyostelium
discoideum AX4
Length = 1220
Score = 36.7 bits (81), Expect = 1.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
P PPP G P P P G PPP GG G PP GG
Sbjct: 584 PPPPPMMGGGPPPPPPPPMMGGGGPPPPPPPPMMGGGPPPPPPMGGKGGPPPPPGG 639
>UniRef50_Q9M7Y1 Cluster: F3E22.11 protein; n=1; Arabidopsis
thaliana|Rep: F3E22.11 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 147
Score = 36.3 bits (80), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +2
Query: 998 PXPPPX--GXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP G G + P P S P G G PPP G G PP
Sbjct: 52 PPPPPSSSGGGGSYYYSPPPPSSSGGVKYPPPYGGDGYGGYYPPPYYGNYGTPP 105
>UniRef50_A2DLA9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 461
Score = 36.3 bits (80), Expect = 1.7
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = -1
Query: 1179 FXXGXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPXGGGX 1000
F G P G P PP G P P G G G P P
Sbjct: 269 FTAGGAPPDGSAPPPPPSDGSLPPPPPPPP----------GAPGGGAPPPPPPPPPAAAG 318
Query: 999 GXXXPXKXXPPPPP 958
G P PPPPP
Sbjct: 319 GAGVPPPPPPPPPP 332
>UniRef50_A4T9C9 Cluster: Integral membrane protein-like protein; n=1;
Mycobacterium gilvum PYR-GCK|Rep: Integral membrane
protein-like protein - Mycobacterium gilvum PYR-GCK
Length = 335
Score = 35.9 bits (79), Expect = 2.2
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = -1
Query: 1164 PPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPXGGGXGXXXP 985
PP GG P PP GG P P G G P P G G P
Sbjct: 12 PPPQGGYPPPPPSEGGYP---PPPPEGGYPPPPPAGGYQQPPPGGAYPPPPGPGGYPPPP 68
Query: 984 XKXXPPPPP 958
+ PPPP
Sbjct: 69 GQGGYPPPP 77
>UniRef50_A2DC30 Cluster: Formin Homology 2 Domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: Formin Homology 2
Domain containing protein - Trichomonas vaginalis G3
Length = 1128
Score = 35.1 bits (77), Expect = 3.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGGXP 1171
P PPP G P P P P PPP G G PP G P
Sbjct: 609 PPPPPPPPGVAAAAPPPPPPPPGLAGLVPPPPVGAGILPPPPPPPGAPGMPPPPPGMP 666
>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1289
Score = 34.7 bits (76), Expect = 5.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +2
Query: 986 GXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
G P PPP G P P G G PPP G G PP G
Sbjct: 1108 GAPPPPPPPMHGGAPPPPPPPMRGGAPPPPPPPGGRGPGAPPPPPPPGGRAPGPPPPPGP 1167
Query: 1166 XP 1171
P
Sbjct: 1168 RP 1169
Score = 33.9 bits (74), Expect = 8.9
Identities = 28/100 (28%), Positives = 28/100 (28%), Gaps = 5/100 (5%)
Frame = -1
Query: 1242 PPXXXXXXXXGPXXXPXXXXXFXXGXPPXXGGXP-XXPPXGGGXXXXXPXPXXXGXXXXX 1066
PP P P PP GG P PP G P P G
Sbjct: 1077 PPPPMRGGAPPPPPPPMRGGAPPPPPPPMRGGAPPPPPPPMHGGAPPPPPPPMRGGAPPP 1136
Query: 1065 XXGEXGXGXXKXKXPXPXGG-GXGXXXPXKXXPP---PPP 958
G G P P GG G P PP PPP
Sbjct: 1137 PPPPGGRGPGAPPPPPPPGGRAPGPPPPPGPRPPGGGPPP 1176
>UniRef50_A2DM28 Cluster: Diaphanous, putative; n=1; Trichomonas
vaginalis G3|Rep: Diaphanous, putative - Trichomonas
vaginalis G3
Length = 620
Score = 34.7 bits (76), Expect = 5.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 1164 PPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPXGGGXGXXXP 985
PP G P PP G P P G G P P GG P
Sbjct: 504 PPSAPGVPPAPPLPGAGVPPPPPPPGAGAPPPPPP-PAGGAPPPPPPPPPKGGAPPPPPP 562
Query: 984 XKXXPPPP 961
PPPP
Sbjct: 563 PARAPPPP 570
>UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1027
Score = 34.3 bits (75), Expect = 6.7
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXP----XSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
P PPP G G P P P G G PPP GG G PP
Sbjct: 430 PPPPPPGMGGAPPPPPPPPPGMGGGPPPPPPPPPGPGGGPPPPPPPPGGGPPGPPPPPAQ 489
Query: 1166 XP 1171
P
Sbjct: 490 LP 491
Score = 33.9 bits (74), Expect = 8.9
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +2
Query: 977 FFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPP-----PXGGXX 1141
F+ P PPP G P P P G G PP P GG
Sbjct: 411 FYFSGPPPPPPPPGGVPPPPPPPPPGMGGAPPPPPPPPPGMGGGPPPPPPPPPGPGGGPP 470
Query: 1142 GXPPXXGGXP 1171
PP GG P
Sbjct: 471 PPPPPPGGGP 480
>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
Emericella nidulans (Aspergillus nidulans)
Length = 1790
Score = 34.3 bits (75), Expect = 6.7
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 7/59 (11%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXX-------GXGXXXXXPPPXGGXXGXPP 1153
P PPP G G P P P P G G PPP GG G PP
Sbjct: 1040 PPPPPPGAGAAPPPPPPPPPPPPGGLGGPPPPPPPPPPGGFGGPPPPPPPPGGFGGPPP 1098
>UniRef50_A6APN4 Cluster: Insecticidal toxin, SepC/Tcc class; n=2;
Vibrio harveyi|Rep: Insecticidal toxin, SepC/Tcc class -
Vibrio harveyi HY01
Length = 378
Score = 29.1 bits (62), Expect(2) = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 1023 PXPXGGGXGXXXPXKXXPPPPP 958
P P GGG P PPPPP
Sbjct: 107 PPPMGGGAPPPPPGPGAPPPPP 128
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = -1
Query: 1164 PPXXGGXPXXPPXGGGXXXXXPXPXXXG 1081
PP P PP GG P P G
Sbjct: 86 PPPRMAPPPPPPPAGGMPPPPPPPMGGG 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,877,546
Number of Sequences: 1657284
Number of extensions: 13763543
Number of successful extensions: 32803
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30576
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127555079085
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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