BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I05
(1257 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113553-1|AAM29558.1| 126|Drosophila melanogaster RH01479p pro... 73 1e-12
AE013599-478|AAF59209.1| 126|Drosophila melanogaster CG1577-PA ... 73 1e-12
U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptid... 33 1.1
BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p pro... 33 1.1
AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p pro... 33 1.1
AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-P... 33 1.1
AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-P... 33 1.1
AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-P... 33 1.1
AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-P... 33 1.1
AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-P... 33 1.1
AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p pro... 31 4.4
AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-P... 31 4.4
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 30 5.8
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 30 5.8
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 30 5.8
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 30 5.8
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 30 5.8
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 30 5.8
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 30 5.8
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 30 5.8
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 30 5.8
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 30 7.6
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 30 7.6
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 30 7.6
>AY113553-1|AAM29558.1| 126|Drosophila melanogaster RH01479p
protein.
Length = 126
Score = 72.5 bits (170), Expect = 1e-12
Identities = 37/88 (42%), Positives = 47/88 (53%)
Frame = +1
Query: 214 KNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSEL 393
+ WR A+GLP N NA G LT+ PDYT+LDGRPTP A +IV LS EL
Sbjct: 31 QKWRAAKGLPENPNAFGPLTNLPDYTYLDGRPTPLGANQKRRLIKQQEIATRIVELSGEL 90
Query: 394 QFAKDRYXXXXXXXXXXXXXXLNNRLKP 477
+FAK R+ + ++LKP
Sbjct: 91 EFAKQRHERLKANAESEKQRLIRSKLKP 118
>AE013599-478|AAF59209.1| 126|Drosophila melanogaster CG1577-PA
protein.
Length = 126
Score = 72.5 bits (170), Expect = 1e-12
Identities = 37/88 (42%), Positives = 47/88 (53%)
Frame = +1
Query: 214 KNWRVARGLPVNRNAEGILTDGPDYTFLDGRPTPXXXXXXXXXXXXXXXAEQIVTLSSEL 393
+ WR A+GLP N NA G LT+ PDYT+LDGRPTP A +IV LS EL
Sbjct: 31 QKWRAAKGLPENPNAFGPLTNLPDYTYLDGRPTPLGANQKRRLIKQQEIATRIVELSGEL 90
Query: 394 QFAKDRYXXXXXXXXXXXXXXLNNRLKP 477
+FAK R+ + ++LKP
Sbjct: 91 EFAKQRHERLKANAESEKQRLIRSKLKP 118
>U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptide
protein.
Length = 684
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 399 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 457 GGGPPPAPGGP 467
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 402 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 461
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 462 PAPGGPGAPPPPP 474
>BT004488-1|AAO42652.1| 687|Drosophila melanogaster LD23655p protein.
Length = 687
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 402 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 459
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 460 GGGPPPAPGGP 470
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 405 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 464
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 465 PAPGGPGAPPPPP 477
>AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p protein.
Length = 831
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 545 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 602
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 603 GGGPPPAPGGP 613
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 548 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 607
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 608 PAPGGPGAPPPPP 620
>AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-PB,
isoform B protein.
Length = 829
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 544 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 601
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 602 GGGPPPAPGGP 612
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 547 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 606
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 607 PAPGGPGAPPPPP 619
>AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-PE,
isoform E protein.
Length = 684
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 399 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 457 GGGPPPAPGGP 467
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 402 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 461
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 462 PAPGGPGAPPPPP 474
>AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-PC,
isoform C protein.
Length = 684
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 399 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 457 GGGPPPAPGGP 467
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 402 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 461
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 462 PAPGGPGAPPPPP 474
>AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-PA,
isoform A protein.
Length = 684
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 399 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 456
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 457 GGGPPPAPGGP 467
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 402 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 461
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 462 PAPGGPGAPPPPP 474
>AE013599-2825|AAX52696.1| 687|Drosophila melanogaster CG15112-PD,
isoform D protein.
Length = 687
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +2
Query: 959 GGGGGXFFXGXXXPXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGX 1138
GG GG P PPP G P P P P G PP
Sbjct: 402 GGPGGP--PAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAM 459
Query: 1139 XGXPPXXGGXP 1171
G PP G P
Sbjct: 460 GGGPPPAPGGP 470
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 1170 GXPPXXGGXPXXPPXGGGXXXXXPXPXXXGXXXXXXXGEXGXGXXKXKXPXPX--GGGXG 997
G PP P P GG P P G P P GGG
Sbjct: 405 GGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGGPP 464
Query: 996 XXXPXKXXPPPPP 958
PPPPP
Sbjct: 465 PAPGGPGAPPPPP 477
>AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p protein.
Length = 416
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
P P P G P +P P G G PP GG G PP GG
Sbjct: 61 PGPQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQ---PPYAGGPGGQPPYVGG 113
>AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-PA,
isoform A protein.
Length = 416
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPPXXGG 1165
P P P G P +P P G G PP GG G PP GG
Sbjct: 61 PGPQPAGYAPVPQMPPYGEAPPYGAGQPPYMGGPGGQ---PPYAGGPGGQPPYVGG 113
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous protein
protein.
Length = 1091
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP G G P P P P G G PPP G G PP
Sbjct: 514 PPPPPGGGGAP----PPPPPPM------PGRAGGGPPPPPPPPMPGRAGGPP 555
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p protein.
Length = 1091
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP G G P P P P G G PPP G G PP
Sbjct: 514 PPPPPGGGGAP----PPPPPPM------PGRAGGGPPPPPPPPMPGRAGGPP 555
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p protein.
Length = 1049
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP F P P P P PPP G PP
Sbjct: 475 PPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPP 526
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP G G P P P P G G PPP G G PP
Sbjct: 514 PPPPPGGGGAP----PPPPPPM------PGRAGGGPPPPPPPPMPGRAGGPP 555
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 30.3 bits (65), Expect = 5.8
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP G G P P P P G G PPP G G PP
Sbjct: 514 PPPPPGGGGAP----PPPPPPM------PGRAGGGPPPPPPPPMPGRAGGPP 555
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP F P P P P PPP G PP
Sbjct: 485 PPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPP 536
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP F P P P P PPP G PP
Sbjct: 475 PPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPP 526
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP F P P P P PPP G PP
Sbjct: 633 PPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPP 684
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 998 PXPPPXGXGXXXFXXPXPXSPXXXXXXXPXXXGXGXXXXXPPPXGGXXGXPP 1153
P PPP F P P P P PPP G PP
Sbjct: 580 PPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPP 631
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 113 LVYLKGKMKTRKQFLGYSHRPSVIKVXSEGFPI 15
++YL G TR+ LG + P +I V G PI
Sbjct: 1380 VLYLGGPAPTRESLLGATTEPGIIPVPGAGIPI 1412
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 113 LVYLKGKMKTRKQFLGYSHRPSVIKVXSEGFPI 15
++YL G TR+ LG + P +I V G PI
Sbjct: 1380 VLYLGGPAPTRESLLGATTEPGIIPVPGAGIPI 1412
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 113 LVYLKGKMKTRKQFLGYSHRPSVIKVXSEGFPI 15
++YL G TR+ LG + P +I V G PI
Sbjct: 1423 VLYLGGPAPTRESLLGATTEPGIIPVPGAGIPI 1455
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,352,695
Number of Sequences: 53049
Number of extensions: 749790
Number of successful extensions: 2342
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6743497755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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