Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I03
         (1257 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0536 + 23730396-23731736                                         30   4.4  
10_05_0049 + 8548732-8549433                                           29   5.8  

>02_04_0536 + 23730396-23731736
          Length = 446

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = -2

Query: 254 TTPNRXRSCTPYQDDASLRLRGEREFG*SDCASRSQPPWXATGDQHEGPGTTRAASARCW 75
           +T +R + C PY DD    LR   +    D A R  P +    D  +G   + AA A   
Sbjct: 203 STASRPQLCAPYDDDIDANLRDMEK----DAAQRPSPDYL---DTVQGGQISAAARASLV 255

Query: 74  KWXG 63
            W G
Sbjct: 256 AWMG 259


>10_05_0049 + 8548732-8549433
          Length = 233

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 235 AAARPIKMTQA*D*GVRGNLVEAIVRAEASPL-GERPETSTRGLAQHVPRARGAGNGXXX 59
           AAA P ++T   D G R      +  A A    G R E S+ GL      +RG G G   
Sbjct: 88  AAATPGEVTAQPD-GARARRERRLEAAGAKEREGRRRERSSGGLRGKWRASRGRGGGCEA 146

Query: 58  KR*GAEAEMKXGHEXG 11
           +  G  A  + G E G
Sbjct: 147 EGGGGAASQRTGKETG 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,746,240
Number of Sequences: 37544
Number of extensions: 174246
Number of successful extensions: 699
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3887643768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)