Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I01
         (1102 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.77 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   9.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   9.5  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 660 SLQYNLSPGFATNLCANSF*NMSTAHLKKGLCSSNLNTKG 541
           ++ Y+L+  F T L A S+ ++ + + + G CS    T G
Sbjct: 425 TIGYDLNQHFETGLPAGSYCDVISGNAENGSCSGKTITVG 464


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 660 SLQYNLSPGFATNLCANSF*NMSTAHLKKGLCSSNLNTKG 541
           ++ Y+L+    T L A S+ ++ + + + G CS    T G
Sbjct: 424 TIGYDLNQHLQTGLPAGSYCDVISGNAENGSCSGKTITVG 463


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 660 SLQYNLSPGFATNLCANSF*NMSTAHLKKGLCSSNLNTKG 541
           ++ Y+L+    T L A S+ ++ + + + G CS    T G
Sbjct: 425 TIGYDLNQHLQTGLPAGSYCDVISGNAENGSCSGKTITVG 464


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 101 NHYV-VNPFITLSNYRVSLKMPKIKAEKKTRIHKEIAKQGIQFNKDFGQHIL 253
           N Y+ + P   +SN RV +   KI       +H+ ++K    FN+ FG  +L
Sbjct: 203 NQYLRLKPEGRISNRRVFISFSKI-----CYLHQHLSKSVKLFNEVFGVSLL 249


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 101 NHYV-VNPFITLSNYRVSLKMPKIKAEKKTRIHKEIAKQGIQFNKDFGQHIL 253
           N Y+ + P   +SN RV +   KI       +H+ ++K    FN+ FG  +L
Sbjct: 221 NQYLRLKPEGRISNRRVFISFSKI-----CYLHQHLSKSVKLFNEVFGVSLL 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,161
Number of Sequences: 336
Number of extensions: 4666
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 31753876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)