Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I01
         (1102 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-1|CAA87382.2|  308|Caenorhabditis elegans Hypothetical pr...   291   8e-79
U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical pr...    56   4e-08
Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF324489-1|AAK49910.1|  351|Caenorhabditis elegans F44C8.7-like ...    30   3.4  
AF016438-4|AAB65894.2|  351|Caenorhabditis elegans Hypothetical ...    30   3.4  

>Z47075-1|CAA87382.2|  308|Caenorhabditis elegans Hypothetical
           protein E02H1.1 protein.
          Length = 308

 Score =  291 bits (713), Expect = 8e-79
 Identities = 143/260 (55%), Positives = 178/260 (68%), Gaps = 1/260 (0%)
 Frame = +2

Query: 158 MPKIKAEKKTRIHKEIAK-QGIQFNKDFGQHILKNPLIITSMLDKSGLRPTDVALEIGPG 334
           M K    KKT+        Q + FN D GQHILKNP ++ ++++KS L+ TD  LE+GPG
Sbjct: 1   MGKTSKVKKTKAGSSTGNVQSLPFNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPG 60

Query: 335 TGNMTVKLLDRVKKVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICV 514
           TGN+TVK+L+  K V+ACEID R++AE++KRV GTP Q KLQ+  GDV+K E PFFD+CV
Sbjct: 61  TGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFDVCV 120

Query: 515 ANIPYQISSPLVFKLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLYCRLSINTQLLARVD 694
           AN+PYQISSP V KLLLHRP  R AVLMFQKEFA RLVA+PGDK Y RLS+N QLLA+V+
Sbjct: 121 ANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVE 180

Query: 695 MLMKVGKNNFRPPPKVESSXXXXXXXXXXXXXXFVXWDGLTXIAFVRKNKTLSAAFKHAT 874
           MLMKV +  FRPPPKV+S+              FV W+GL  + F+RKNKTL A F+ + 
Sbjct: 181 MLMKVKRTEFRPPPKVDSAVVRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLMAIFRLSN 240

Query: 875 TXAAWXKNYRVHGXLHNKEI 934
                  N+R      NK I
Sbjct: 241 VIEVIEDNFRKVCSFKNKPI 260


>U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical
           protein T03F1.7 protein.
          Length = 367

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
 Frame = +2

Query: 218 IQFNKDFGQHILKNPLIITSMLDKSGLRPTDVALEIGPGTGNMTVKLLDR-VKKVLACEI 394
           ++  K   Q+ L +  I   +   + +   D  +EIGPG G +T  +L+    ++   EI
Sbjct: 22  LRAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAILEAGASRLDVVEI 81

Query: 395 DTRLVAELQKRVQGTP------YQAKLQILVGDVLKTE-------------LPFFDICVA 517
           D R +  LQ   +         +Q  L+  +GD+ K E             LP   + + 
Sbjct: 82  DNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWKNETARPESVDWHDSNLPAMHV-IG 140

Query: 518 NIPYQISSPLVFKLLLHRPFFRCA--------VLMFQKEFAQRLVAKPGDKLYCRLSINT 673
           N+P+ I+SPL+ K L    + R           L FQ E A+RL +        R+SI +
Sbjct: 141 NLPFNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSPIACDTRSRISIMS 200

Query: 674 QLLARVDMLMKVGKNNFRPPPKVE 745
           Q +A   M+ ++  + F P P+V+
Sbjct: 201 QYVAEPKMVFQISGSCFVPRPQVD 224


>Z46241-7|CAA86320.1|  214|Caenorhabditis elegans Hypothetical
           protein C38D4.9 protein.
          Length = 214

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
 Frame = +2

Query: 317 LEIGPGTGNM--TVKLLDRVKKVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVL--K 484
           ++IG G G +  T   +  ++ VL  +ID   +    + ++    Q + ++L  D+L  +
Sbjct: 52  IDIGCGCGMLMTTAATMYELETVLGVDIDDEALKICSRNLETAEVQDRCELLQADILDPE 111

Query: 485 TELP--FFDICVANIPY 529
           ++LP   FD+ V N P+
Sbjct: 112 SDLPRGTFDVAVINPPF 128


>AF324489-1|AAK49910.1|  351|Caenorhabditis elegans F44C8.7-like
           protein protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 23/93 (24%), Positives = 44/93 (47%)
 Frame = +2

Query: 374 KVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVF 553
           ++L  EID ++ +     +QG      L ++      T +PFF + +AN  + + +  VF
Sbjct: 7   QILDLEIDKKVKSSSSSIIQGLCSIQLLSMIAVTAHHTAMPFF-VQMANTSHFLPTTSVF 65

Query: 554 KLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLY 652
            + + +  F C +++    F  +   K G KLY
Sbjct: 66  MMEVLKLLF-CLIIVL---FKTKSFEKTGKKLY 94


>AF016438-4|AAB65894.2|  351|Caenorhabditis elegans Hypothetical
           protein F44C8.7 protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 23/93 (24%), Positives = 44/93 (47%)
 Frame = +2

Query: 374 KVLACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVF 553
           ++L  EID ++ +     +QG      L ++      T +PFF + +AN  + + +  VF
Sbjct: 7   QILDLEIDKKVKSSSSSIIQGLCSIQLLSMIAVTAHHTAMPFF-VQMANTSHFLPTTSVF 65

Query: 554 KLLLHRPFFRCAVLMFQKEFAQRLVAKPGDKLY 652
            + + +  F C +++    F  +   K G KLY
Sbjct: 66  MMEVLKLLF-CLIIVL---FKTKSFEKTGKKLY 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,144,509
Number of Sequences: 27780
Number of extensions: 411587
Number of successful extensions: 875
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2971275592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)