Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H23
(1171 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.22
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 33 0.51
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 0.56
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.90
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.6
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 2.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 25 4.1
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 29 6.3
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 6.3
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 6.3
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 6.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 8.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 8.4
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 39.1 bits (87), Expect = 0.006
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 582 PPXXLXXPXXPLXCPXPPLFXXGXCXPPPKXXPPXP 475
PP + P PL CP PP+ C PPP PP P
Sbjct: 33 PPPPMCAPP-PLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = -2
Query: 606 PPFXXXLFPPXXLXXPXXPLX----CPXPPLFXXGXCXPPPKXXPPXP 475
PP + P L P P+ CP PP+ PPP PP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.22
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP G PP P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP PP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P P PP G PP P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 608 PPPXGXXFFPPFXWXX-PXXPXXALXPPFFXXGXAXPPLXXXPPXPXXGG 462
PPP PP P P A PP G PP PP P GG
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.22
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP G PP P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP PP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P P PP G PP P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 608 PPPXGXXFFPPFXWXX-PXXPXXALXPPFFXXGXAXPPLXXXPPXPXXGG 462
PPP PP P P A PP G PP PP P GG
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.22
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP G PP P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P PP PP PP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PPP G P P PP G PP P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 608 PPPXGXXFFPPFXWXX-PXXPXXALXPPFFXXGXAXPPLXXXPPXPXXGG 462
PPP PP P P A PP G PP PP P GG
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 32.7 bits (71), Expect = 0.51
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = +2
Query: 476 GXGGFXLGGGXXXPXXKRGGXGQXRGXXGNXXKXGGKRXXXKGG 607
G GGF GGG P RGG G RG G GG GG
Sbjct: 300 GRGGF--GGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGG 341
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect(2) = 0.56
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 543 CPXPPLFXXGXCXPPPKXXPPXP 475
CP PP C PPP PP P
Sbjct: 54 CPPPPPCPAQFCPPPPICPPPPP 76
Score = 21.8 bits (44), Expect(2) = 0.56
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 396 VXXPXPFXPPXLPPPPXAXP 337
+ P P P PPPP P
Sbjct: 70 ICPPPPPPPMPCPPPPPPMP 89
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.90
Identities = 33/125 (26%), Positives = 37/125 (29%), Gaps = 3/125 (2%)
Frame = +2
Query: 242 GGGXGXXKRKSFGERGXE*KKXGKKKIXXXKKGX--AXGGGGRXGGXKGX-GXXTXXXXX 412
GGG G + G+ G G +G GGGGR GG +G G
Sbjct: 54 GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGG 113
Query: 413 XXXXXXXXXXXXXXKKXPPPXGXGGFXLGGGXXXPXXKRGGXGQXRGXXGNXXKXGGKRX 592
G GG GG P GG G G G GG R
Sbjct: 114 NWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGG-GDWGGNGGGGRGGGGGRG 172
Query: 593 XXKGG 607
GG
Sbjct: 173 GGGGG 177
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/91 (28%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Frame = +2
Query: 338 GXAXGGGGRXGGXK-GXGXXTXXXXXXXXXXXXXXXXXXXKKXPPPXGXGGFXLGGGXXX 514
G GGGG GG G G PPP GG GGG
Sbjct: 71 GCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 130
Query: 515 PXXKRGGXGQXRGXXGNXXKXGGKRXXXKGG 607
GG G G G GG GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -3
Query: 932 PPXXGXPXXPPXXXXPPXXXGXXPPXPXXXXXXLFXFXXXXXPXXXXGXFXXGXXXXXXX 753
PP G P PP PP G PP P + P G
Sbjct: 707 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 752 XXGXPPPEXXXFFFFFXGGXP 690
G PPP F GG P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 540 PXPPLFXXGXCXPPPKXXPPXPXGGG 463
P PP G C PPP PP GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -3
Query: 932 PPXXGXPXXPPXXXXPPXXXGXXPPXPXXXXXXLFXFXXXXXPXXXXGXFXXGXXXXXXX 753
PP G P PP PP G PP P + P G
Sbjct: 707 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 752 XXGXPPPEXXXFFFFFXGGXP 690
G PPP F GG P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 540 PXPPLFXXGXCXPPPKXXPPXPXGGG 463
P PP G C PPP PP GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = -3
Query: 932 PPXXGXPXXPPXXXXPPXXXGXXPPXPXXXXXXLFXFXXXXXPXXXXGXFXXGXXXXXXX 753
PP G P PP PP G PP P + P G
Sbjct: 290 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 752 XXGXPPPEXXXFFFFFXGGXP 690
G PPP F GG P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPP 330
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 935 PPPXXGXPXXPPXXXXPPXXXGXXPPXP 852
PP G P PP PP G PP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 540 PXPPLFXXGXCXPPPKXXPPXPXGGG 463
P PP G C PPP PP GG
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGG 366
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 476 GXGGFXLGGGXXXPXXKRGGXGQXRGXXGNXXKXGGKRXXXKGG 607
G GGF GGG RGG G RG GG R +GG
Sbjct: 173 GRGGFGRGGGGGFRGGDRGGFGGGRGGF-----RGGDRGGFRGG 211
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 387 PXPFXPPXLPPPPXAXP 337
P P PP PPPP P
Sbjct: 136 PTPAAPPPPPPPPPPAP 152
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -2
Query: 552 PLXCPXPPLFXXGXCXPPPKXXPPXP 475
P P PP C PP PP P
Sbjct: 119 PGGVPAPPNPPRTCCPPPTPAAPPPP 144
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 464 PPPXGXGGFXLGGGXXXPXXKRGGXGQXRGXXGNXXKXGGKRXXXKGG 607
P G GGF GG RGG G G GN GG +GG
Sbjct: 41 PGQFGRGGFG-GGPGSNYGPGRGGFGGNGGFGGNGGFGGGPSYGGRGG 87
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 415 KQKTPPRXXXXSFXPXXPSSPPP 347
+++TPP F P PS+PPP
Sbjct: 1112 ERRTPPNKTLMDFIPPPPSNPPP 1134
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 415 KQKTPPRXXXXSFXPXXPSSPPP 347
+++TPP F P PS+PPP
Sbjct: 1112 ERRTPPNKTLMDFIPPPPSNPPP 1134
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 415 KQKTPPRXXXXSFXPXXPSSPPP 347
+++TPP F P PS+PPP
Sbjct: 1112 ERRTPPNKTLMDFIPPPPSNPPP 1134
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = -2
Query: 627 KGXFXVXPPFXXXLFPPXXLXXPXXPLXCPXPPLFXXGXCXPPPK---XXPPXP 475
K F + PP PP P P P PP G PPP PP P
Sbjct: 60 KPSFFIPPPVPNGFIPP-----PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 387 PXPFXPPXLPPPPXAXPFXXXXIXXXXXXFHSXPLSPKLFLXXXPXPPP 241
P P P +PPPP P I P P +F P PPP
Sbjct: 75 PPPPGPGGIPPPP---PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 476 GXGGFXLGGGXXXPXXKRGGXGQXRGXXGNXXKXGGKRXXXKGG 607
G GG GGG GG G G G GG+ GG
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.150 0.476
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,526,529
Number of Sequences: 27780
Number of extensions: 201323
Number of successful extensions: 920
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3192944148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -