Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H20
(1199 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1084 - 24232968-24234779 35 0.15
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.34
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 31 1.8
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 1.8
02_01_0746 + 5554686-5556179 31 2.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.1
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 30 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 4.2
02_02_0240 + 8196140-8198248,8198381-8198650 30 4.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.5
07_03_1136 + 24218601-24218734,24218769-24219906 29 7.3
07_01_0479 + 3606663-3607448 29 7.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 7.3
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 29 9.6
02_04_0408 + 22655454-22655520,22656055-22656356 29 9.6
>08_02_1084 - 24232968-24234779
Length = 603
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +3
Query: 537 GGGXGFXPPXGGXXGXPKXGGXXXKKXFXKXXXKGXKTKXGXGGGXFXXGPPPXKKKKKX 716
GGG P GG G + GG G G GGG GP + +
Sbjct: 292 GGGGAGSPQVGGNYGGGRGGGPGGGAG-------GGGGNWGRGGGGMGRGPAGNMRNRMG 344
Query: 717 XPXXGGGXPXGXXKXPGXPPKKPPXG 794
P G G PP PP G
Sbjct: 345 GPAGGRGIMGNGGMVAPPPPMLPPGG 370
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.34
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXP 464
PP G P PP G P PPP PG GG P K P
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPP---PGGKKGGPPPPPPKGGASRP 389
Score = 33.1 bits (72), Expect = 0.45
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +3
Query: 687 PPPXKKKKKXXPXXGGGXPXGXXKXPGXPPKKPPXGXXXXXPGXKK-KIXPFXPRGXGGX 863
PPP K P G P P PP K P PG KK P P+G
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASR 388
Query: 864 XXXXPG 881
PG
Sbjct: 389 PPAAPG 394
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 670 PPPXPFLVXXPFXXXFXKXFXXXXPPFXGXPXXPPXGGXKPXPPPXXXGP 521
PPP P P PP G P PP G P PPP P
Sbjct: 317 PPPKPAAAAPPPPPP--PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/67 (28%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +3
Query: 657 GXGGGXFXXGPPPXKKKKKXXPXXGGGXPXGXXKXPGXPP---KKPPXGXXXXXPGXKKK 827
G GGG F GPPP ++ P G PP +PP G K+
Sbjct: 25 GGGGGEFYRGPPPQPPMRQLSAASSTNIPGDYAAHQGHPPPQQNQPPYDAYGDNFGAKRM 84
Query: 828 IXPFXPR 848
P R
Sbjct: 85 RKPVQRR 91
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 493 PXPXPXKKNRXPGXXGGGXVXPPXXGGKXXXXKXGGXPXKKXXKXGXXKGXKP 651
P P P K P G PP G K K G P K K G KP
Sbjct: 159 PGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKP 211
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGP 521
PP G PP G KP P P GP
Sbjct: 180 PPKPGPKPKPPKPGPKPKPKPPKPGP 205
>02_01_0746 + 5554686-5556179
Length = 497
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 3 PHAPLHGATLSXSPLRDLV 59
PH LHG T+S SPLR LV
Sbjct: 428 PHLNLHGVTVSRSPLRGLV 446
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPG 518
PPF P PP G P P GPG
Sbjct: 49 PPFLAPPPPPPPGPPPPHQPQFNFGPG 75
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 974 FXPXXXPXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPG 843
F P P G P G PPP PP PP PG
Sbjct: 18 FPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPG 61
Score = 29.1 bits (62), Expect = 7.3
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -1
Query: 671 PPXXPXFGFXPFXXPFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGXG 492
PP P +G P P G PP F PP G PPP P F G G
Sbjct: 32 PPQQPAYGHMP--PP------QGAPPPFLAPPPPPPPG---PPPPHQPQFNF-----GPG 75
Query: 491 PPKXXPXXP 465
PP+ P
Sbjct: 76 PPQQQQPPP 84
Score = 29.1 bits (62), Expect = 7.3
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -2
Query: 748 PXGFPPPXXXXXXXXXXXXXGPXXKXPPPXP--FLVXXPFXXXFXKXFXXXXPPFXGXPX 575
P G PPP P + PPP P + P + PP P
Sbjct: 59 PPGPPPPHQPQFNFGPGP---PQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPS 115
Query: 574 XPPXGGXKPXPPPXXXGP 521
PP P PPP P
Sbjct: 116 PPPSAPPPPPPPPTQPPP 133
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 639 GXKTKXGXGGGXFXXGPPPXKKKKKXXPXXGGGXPXGXXKXPGXPPKKP 785
G + G GG P P +KK K P G P PP +P
Sbjct: 53 GLEATTGAGGDVASDDPGPARKKGKVQPATKGAKGKAARADPPTPPPRP 101
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 4.2
Identities = 38/154 (24%), Positives = 41/154 (26%), Gaps = 4/154 (2%)
Frame = -1
Query: 968 PXXXPXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXP-GXKGXNFFFXXRXXXXXX 792
P P G PP G PP PP PP P G G +
Sbjct: 1086 PPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGH----QAPPAPPL 1141
Query: 791 PGGFFGGXPXXFXXXXG--XSPPXXXXXXXXXXXXXGXXXKXPPXXPXFGFXPFXXPFXK 618
P G G P G +PP PP P G P
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP 1201
Query: 617 XFFXGXP-PXFXXXXXPPXXGGKTXPPPXXPGXR 519
P P PP GG+ P P PG R
Sbjct: 1202 PGAPAPPMPPGVPGGPPPPPGGRGLPAP--PGGR 1233
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 543 PPPXPXXP--VFFXGXXGXAPKXXPPXPPGXGXF 448
PPP P P + G G P PP PPG +
Sbjct: 596 PPPIPGQPQVIRMPGSMGPMPTNIPPPPPGQNPY 629
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 580 PXXPPXGGXKPXPPP 536
P PP GG KP PPP
Sbjct: 23 PPPPPGGGAKPEPPP 37
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 543 PPPXPXXPVFFXGXXGXAPKXXPPXPPG 460
PPP P P G G PP PPG
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPPG 259
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +1
Query: 454 PXPXGXXGXXFGGPXPXPXKKNRXPGXXGGGXVXPPXXGGKXXXXKXGGXPXKKXXKXGX 633
P P G G G + PG GGG PP GG GG P + G
Sbjct: 98 PGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG----GGGGGAPRRVLGGGGG 153
Query: 634 XKG-XKPKXGXXGG 672
+P G GG
Sbjct: 154 GGALARPPGGGRGG 167
Score = 29.1 bits (62), Expect = 7.3
Identities = 24/86 (27%), Positives = 28/86 (32%), Gaps = 10/86 (11%)
Frame = +3
Query: 540 GGXGFXPPXGGXXGXPKX------GGXXXKKXFXKXXXKGXKTKX----GXGGGXFXXGP 689
GG G PP GG G P GG + G + G GGG P
Sbjct: 102 GGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPP 161
Query: 690 PPXKKKKKXXPXXGGGXPXGXXKXPG 767
+ P GGG G + PG
Sbjct: 162 GGGRGGALGRPPGGGGGGGGPGRAPG 187
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 669 GXFXXGPPPXKKKKKXXPXXGGGXPXGXXKXPGXPPKKPPXGXXXXXPGXKK 824
G F GPPP + P GG P G PG PP G PG ++
Sbjct: 206 GPFMRGPPPMGPPQ-VRPGMPGGPPPG--MRPGMPPPPFRPGMPPPPPGPQQ 254
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +3
Query: 720 PXXGGGXPXGXXKXPGXPPKKPPXGXXXXXPGXKKKIXPFXPRGXGGXXXXXPGG 884
P GG P G PP PP PG + + P G GG GG
Sbjct: 340 PSSYGGGPGSYPPSYGAPPPNPPYS--GGAPGGQGSLPPSYDGGYGGRPMPGGGG 392
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 580 PXXPPXGGXKPXPPPXXXGPGFFXGGXG-XGP 488
P PP G + PPP G G GG G GP
Sbjct: 50 PPPPPDDGGEFPPPPDDGGEGVSEGGAGVAGP 81
>02_04_0408 + 22655454-22655520,22656055-22656356
Length = 122
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 595 PFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGP 488
P+ P P GG PPP GPG++ G P
Sbjct: 60 PYYPGPWWWPNGGGFYPPPPFNGGPGWYDPQFGGCP 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.151 0.502
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,095,879
Number of Sequences: 37544
Number of extensions: 495330
Number of successful extensions: 1001
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3666490380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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