Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H20
(1199 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.025
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.025
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.025
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.30
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.40
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 32 0.70
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.6
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 8.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 8.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 8.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 8.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.025
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPG 843
P GG PP GG PPP PP PP PG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 598 PPFXGX--PXXPPXGGXKPXPPPXXXGPGFFXGGXGXGP 488
PP G P PP GG P PPP PG F GG P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.53
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 957 PXXXXXGVFXXPPXWGGXPPPXGXTPXXXX*XXPPXPG 844
P G PP GG PPP G P PP PG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 968 PXXXPXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXP 846
P P G PP GG PPP PP PP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 923 PPXGGGXPPPXXXPPXXXXXXPPXXPG 843
PP GG PPP P PP PG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -1
Query: 671 PPXXPXFGFXPFXX-PFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGX 495
PP P G P P G PP PP G PPP P F G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 494 GPP 486
PP
Sbjct: 787 PPP 789
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 941 GGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPGXKG 834
GG PP GG PPP PP P P G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.025
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPG 843
P GG PP GG PPP PP PP PG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 598 PPFXGX--PXXPPXGGXKPXPPPXXXGPGFFXGGXGXGP 488
PP G P PP GG P PPP PG F GG P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.53
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 957 PXXXXXGVFXXPPXWGGXPPPXGXTPXXXX*XXPPXPG 844
P G PP GG PPP G P PP PG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 968 PXXXPXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXP 846
P P G PP GG PPP PP PP P
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 923 PPXGGGXPPPXXXPPXXXXXXPPXXPG 843
PP GG PPP P PP PG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -1
Query: 671 PPXXPXFGFXPFXX-PFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGX 495
PP P G P P G PP PP G PPP P F G
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 494 GPP 486
PP
Sbjct: 787 PPP 789
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 941 GGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPGXKG 834
GG PP GG PPP PP P P G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.025
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPG 843
P GG PP GG PPP PP PP PG
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 598 PPFXGX--PXXPPXGGXKPXPPPXXXGPGFFXGGXGXGP 488
PP G P PP GG P PPP PG F GG P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPP--PGGFKGGPPPPP 371
Score = 32.7 bits (71), Expect = 0.53
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 957 PXXXXXGVFXXPPXWGGXPPPXGXTPXXXX*XXPPXPG 844
P G PP GG PPP G P PP PG
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 968 PXXXPXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXP 846
P P G PP GG PPP PP PP P
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 923 PPXGGGXPPPXXXPPXXXXXXPPXXPG 843
PP GG PPP P PP PG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -1
Query: 671 PPXXPXFGFXPFXX-PFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGX 495
PP P G P P G PP PP G PPP P F G
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 494 GPP 486
PP
Sbjct: 370 PPP 372
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 941 GGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPGXKG 834
GG PP GG PPP PP P P G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.30
Identities = 27/107 (25%), Positives = 31/107 (28%), Gaps = 3/107 (2%)
Frame = +3
Query: 684 GPPPXKKKKKXXPXXGGGXPXGXXKXPG---XPPKKPPXGXXXXXPGXKKKIXPFXPRGX 854
G PP ++ P GG P PG PP+ P G P P P G
Sbjct: 349 GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFG--APQGPGGP 406
Query: 855 GGXXXXXPGGXXXXXXXXXXXXXXXXXXXXXPXGGXXWXKXXXGXPP 995
GG PGG P G + G PP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -1
Query: 611 FXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGXGPPKXXPXXPXGXGFF 447
F P F P GG PPP PG + GP P P G G +
Sbjct: 390 FAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGG--XPPPXXXPPXXXXXXPPXXPGXKGXNFF 822
P GGF PP G G PPP PP PP G G N F
Sbjct: 426 PQGGPGGFGPPPPGGPGAYGPPPTGFPP--VGAPPPGAAGAPGGNPF 470
Score = 29.9 bits (64), Expect = 3.7
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Frame = -3
Query: 663 PPXFWFXXLXGPXFXXFFXXXXPXFXGXP--FXPXXGGXNXXPPPXPXXPVFFXGXXGXA 490
PP F GP + P G P + P GG PP P P G G
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP----GAYGPP 447
Query: 489 PKXXPP---XPPG 460
P PP PPG
Sbjct: 448 PTGFPPVGAPPPG 460
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.40
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = -2
Query: 670 PPPXPFLVXXPFXXXFXKXFXXXXPPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXG 491
PPP P + P F P G P PP G P PPP G G
Sbjct: 76 PPPGPGGIPPP-PPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP--------PSGLGVA 126
Query: 490 PQKXXPXXP 464
PQ P P
Sbjct: 127 PQPPRPKTP 135
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXP 846
P GF PP GG PPP PP PP P
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPP---PPMFAGGIPPPPP 99
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 956 PXXXXGGFFXXPPXGGGXPPPXXXPPXXXXXXPPXXPGXKG 834
P GG PP GG PPP PP PP P G
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPP---PPMFGAPPPPPPPSGLG 124
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.70
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 668 PXXPXFGFXPFXXPFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXP 528
P P F P P G PP F PP G PPP P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
Score = 29.5 bits (63), Expect = 4.9
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Frame = -1
Query: 671 PPXXPXFG-------FXPFXXPFXKXFFXGXPPXFXXXXXPPXXGGKTXPP 540
PP P FG F P P G PP F PP G PP
Sbjct: 57 PPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPP 107
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/84 (28%), Positives = 27/84 (32%)
Frame = +3
Query: 537 GGGXGFXPPXGGXXGXPKXGGXXXKKXFXKXXXKGXKTKXGXGGGXFXXGPPPXKKKKKX 716
GGG G+ P GG F G G GG + GPPP
Sbjct: 30 GGGGGYNRPMNSYGNGYNNGGG-----FNNYGNGG-----GFGGNNYNNGPPPFDGGYNR 79
Query: 717 XPXXGGGXPXGXXKXPGXPPKKPP 788
GGG G + PP PP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXG 491
PP G PP G PPP GPG G G G
Sbjct: 183 PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXG 491
PP G PP G PPP GPG G G G
Sbjct: 463 PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -2
Query: 667 PPXPFLVXXPFXXXFXKXFXXXXPPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXG 491
PP P + F F P F P P PPP F GG G G
Sbjct: 682 PPQPPVFVQQFVAPQFVQFVAPQPQFVAVAPQPQFVAVAPVPPPVAPAVAFAGGGGGGG 740
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -1
Query: 671 PPXXPXFGFXPFXXPFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGXG 492
PP P G P P PP P G PPP P RF G G
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS-RFGPPGMGGM 333
Query: 491 PPKXXP 474
PP P
Sbjct: 334 PPPPPP 339
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 685 PXXKXPPPXPFLVXXPFXXXFXKXFXXXXPPFXGXPXXPPX-GGXKPXPPPXXXGP 521
P PP P + P + PP G PP G P PPP GP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.7
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -1
Query: 671 PPXXPXFGFXPFXXPFXKXFFXGXPPXFXXXXXPPXXGGKTXPPPXXPGXRFFFXGXGXG 492
PP P G P P PP P G PPP P RF G G
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS-RFGPPGMGGM 343
Query: 491 PPKXXP 474
PP P
Sbjct: 344 PPPPPP 349
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 685 PXXKXPPPXPFLVXXPFXXXFXKXFXXXXPPFXGXPXXPPX-GGXKPXPPPXXXGP 521
P PP P + P + PP G PP G P PPP GP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 687 PPPXKKKKKXXPXXGGGXPXGXXKXPGXPPKKPPXGXXXXXPGXKKKIXPFXPRGXGG 860
PPP K + P G K P PP P PG K P P G G
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPG 191
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXPXXG 455
PP PP GG PPP P GG G P P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 543 PPPXPXXPVFFXGXXGXAPKXXPPXPP 463
PPP P P+ AP PP PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 543 PPPXPXXPVFFXGXXGXAPKXXPPXPP 463
PPP P P+ AP PP PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 598 PPFXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXPXXG 455
PP PP GG PPP P GG G P P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 592 FXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXPXXG 455
F G PP G P PPP P G P P P G
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 270
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 592 FXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXPXXG 455
F G PP G P PPP P G P P P G
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 291
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -2
Query: 592 FXGXPXXPPXGGXKPXPPPXXXGPGFFXGGXGXGPQKXXPXXPXXG 455
F G PP G P PPP P G P P P G
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 276
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +1
Query: 838 FXPGXXGGXLXXXXGGXXXGGG------XPPPXGGXXKNPP 942
F PG GG + G GGG PPP GG + P
Sbjct: 186 FGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.151 0.502
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,800,548
Number of Sequences: 27780
Number of extensions: 361321
Number of successful extensions: 1031
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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