Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H18
         (1189 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    85   4e-15
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    35   4.7  
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    35   4.7  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 84.6 bits (200), Expect = 4e-15
 Identities = 42/93 (45%), Positives = 47/93 (50%)
 Frame = +2

Query: 599 FPXGPXPLTXXXKXXPQFKGGKPRRXXKNPXXSPLKAPXXXPXXXPCRXPXTCPPXXLRX 778
           F  G  PLT   K   Q +GG+ R+  K+    PL+AP       PCR P TCPP  LR 
Sbjct: 16  FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLRE 75

Query: 779 AXPFXXXHXVGXXXRXRSSXPXXAVCTNPPXXP 877
           A  F   H VG   R RS  P  AVCTNPP  P
Sbjct: 76  AWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 34.7 bits (76), Expect = 4.7
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 584 PXXXXFPXGPXPLTXXXKXXPQFKGGKPRRXXKNPXXSPLKAP 712
           P    F  G  PLT   K   Q  GG+ R+  K+P   PL AP
Sbjct: 79  PRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 34.7 bits (76), Expect = 4.7
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = +1

Query: 724 PVPTLPXTXXLSAXXPSXSXALSXXXXC 807
           PVPTLP T  LSA  PS S ALS    C
Sbjct: 4   PVPTLPLTGYLSAFLPSGSVALSHSSRC 31


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,306,070
Number of Sequences: 1657284
Number of extensions: 6350368
Number of successful extensions: 3913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119132054599
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)