Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H14
         (1159 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0649 + 19212097-19212176,19212448-19212579,19212789-192131...    31   1.7  
12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160     30   4.0  
10_07_0065 - 12527642-12528178,12531443-12531718                       29   7.0  
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467...    29   7.0  

>09_04_0649 +
           19212097-19212176,19212448-19212579,19212789-19213196,
           19213853-19213943,19214198-19214251
          Length = 254

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 942 VLHXICFLDILLSNDLRHLNSILKKGFPLQPQFVLCAIANLPNS 811
           +L  +C  D+  S ++   NS  KK  P  P FVLC ++N P S
Sbjct: 169 LLKEMCIDDMHPSFEVYLPNSKFKKTSPGDPSFVLCLLSNKPPS 212


>12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160
          Length = 1054

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/100 (17%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = +3

Query: 369  NGCDGSFIVNCVISYCIKQNSPLLIVSSHNSITHYHNVGLRMNHNLF--KSCEAGVIDYF 542
            +G + SF+  C     ++  + + I+++ +++ HY N    + +     +  +  +    
Sbjct: 782  HGAERSFLAECEALRSVRHRNLVKIITACSTVDHYGNDFKALVYEFMPNRDLDKWLHPTI 841

Query: 543  DFGDATLTNIMEYAESDQLLIDVLKKIEEMQRNHDTVNII 662
            D  D + + ++  +E  ++ +DV + ++ + R H  V I+
Sbjct: 842  DDDDESFSRVLTMSERLRIALDVAEALDYLHR-HGQVPIV 880


>10_07_0065 - 12527642-12528178,12531443-12531718
          Length = 270

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 348 RIVVKEINGCDGSFIVNC-VISYCIKQNSPLLIVSSHNSITHYHNVGLRM 494
           RI++  + G  G F+V C V+S C+K  +     +      H+H   L M
Sbjct: 108 RIIIAAVAGA-GGFVVACGVLSRCVKAEAAAAAANGRRHHHHHHTTMLLM 156


>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
            29646843-29646899,29647007-29647094,29647304-29647374,
            29647457-29647585,29647662-29648051,29648332-29648517,
            29648612-29648692,29648787-29648879,29648966-29649086,
            29649200-29649409,29649560-29649727,29649898-29650065,
            29650144-29650311,29650453-29650620,29650738-29650905,
            29651023-29651190,29651567-29651734,29652391-29652558,
            29652645-29652812,29655720-29655887,29656069-29656236,
            29656391-29656558,29656670-29656837,29657525-29657664,
            29658033-29658221,29658243-29658315,29658379-29658452,
            29658535-29658654,29658718-29658738,29658794-29658999,
            29659094-29659271,29660066-29660126,29660232-29660341,
            29660427-29660558,29661091-29661258,29661339-29661465,
            29661794-29661831,29663321-29663422,29663505-29663562,
            29663659-29663760,29663844-29663990,29664098-29664234,
            29664313-29664462,29664561-29664720,29665820-29665878,
            29666025-29666181,29666288-29666433,29666523-29666666,
            29667242-29667376
          Length = 2344

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 624  EEMQRNHDTVNIIFDGITHLLDLQYTLQ--EVNKFCSEIIEIAAKSKN 761
            E +++N + +  I D   H+L+LQ+T+Q  E N    E + +  + +N
Sbjct: 1577 EALEKNEELLKKIHDDDKHILELQFTIQRLEENTAAKENLLLREREQN 1624


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,896,089
Number of Sequences: 37544
Number of extensions: 349045
Number of successful extensions: 791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3526513192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)