Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H12
         (1207 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0467 - 18479199-18479543,18481145-18481417                       66   4e-11

>07_03_0467 - 18479199-18479543,18481145-18481417
          Length = 205

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 39/106 (36%), Positives = 59/106 (55%)
 Frame = +1

Query: 226 VPFAAGHQVFXAXQVVKQIXVPSFSGAFGXLPKHVPTLAVLSPGVVTILENXGKQXKIFV 405
           V F   ++   A + V  + VP+ +G  G LP HV T+A L PGV+++ E      K FV
Sbjct: 77  VNFVLPYKSEIANKEVDMVIVPATTGQMGVLPGHVSTIAELKPGVLSVHEG-NDITKYFV 135

Query: 406 SSGTITVNXXSSVQVLAEXAHPLEXIDRSAAQEALSKAQSEFNSAS 543
           SSG   V+  S   ++A  A PL+ ID +A Q+ L++  ++  SAS
Sbjct: 136 SSGFAFVHANSIADIVAVEAVPLDQIDPAAVQQGLAEFNAKLGSAS 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,173,577
Number of Sequences: 37544
Number of extensions: 146099
Number of successful extensions: 266
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)