Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H12
         (1207 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p pro...   128   2e-29
AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA...   128   2e-29
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB...    30   7.3  
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA...    30   7.3  

>AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p
           protein.
          Length = 157

 Score =  128 bits (308), Expect = 2e-29
 Identities = 63/105 (60%), Positives = 79/105 (75%)
 Frame = +1

Query: 232 FAAGHQVFXAXQVVKQIXVPSFSGAFGXLPKHVPTLAVLSPGVVTILENXGKQXKIFVSS 411
           FAA ++ F    VV+QI VPSFSG+FG L KHVPTLAVL PGVV ++EN GK  K FVSS
Sbjct: 31  FAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQVVENDGKTLKFFVSS 90

Query: 412 GTITVNXXSSVQVLAEXAHPLEXIDRSAAQEALSKAQSEFNSASN 546
           G++TVN  SSVQVLAE AH +E ID + A++ L+K QS+ +SA +
Sbjct: 91  GSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGD 135


>AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA
           protein.
          Length = 157

 Score =  128 bits (308), Expect = 2e-29
 Identities = 63/105 (60%), Positives = 79/105 (75%)
 Frame = +1

Query: 232 FAAGHQVFXAXQVVKQIXVPSFSGAFGXLPKHVPTLAVLSPGVVTILENXGKQXKIFVSS 411
           FAA ++ F    VV+QI VPSFSG+FG L KHVPTLAVL PGVV ++EN GK  K FVSS
Sbjct: 31  FAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQVVENDGKTLKFFVSS 90

Query: 412 GTITVNXXSSVQVLAEXAHPLEXIDRSAAQEALSKAQSEFNSASN 546
           G++TVN  SSVQVLAE AH +E ID + A++ L+K QS+ +SA +
Sbjct: 91  GSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGD 135


>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
            isoform B protein.
          Length = 4685

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 277  QIXVPSFSGAFGXLPKHVPTLAVLSPGVVTI--LENXGKQXKIFVSSGT-ITVNXXSSVQ 447
            +I  P F   F  L    P   +LSPGV  I  +E  G++      S T + ++     +
Sbjct: 4074 EIQTPPFGAIFQELNAATPAFFILSPGVDPIRDVERYGQRQGFHSESDTLVNISLGQGQE 4133

Query: 448  VLAEXA 465
            +LAE A
Sbjct: 4134 LLAEQA 4139


>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
            isoform A protein.
          Length = 4543

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 277  QIXVPSFSGAFGXLPKHVPTLAVLSPGVVTI--LENXGKQXKIFVSSGT-ITVNXXSSVQ 447
            +I  P F   F  L    P   +LSPGV  I  +E  G++      S T + ++     +
Sbjct: 3932 EIQTPPFGAIFQELNAATPAFFILSPGVDPIRDVERYGQRQGFHSESDTLVNISLGQGQE 3991

Query: 448  VLAEXA 465
            +LAE A
Sbjct: 3992 LLAEQA 3997


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,990,756
Number of Sequences: 53049
Number of extensions: 252981
Number of successful extensions: 325
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6397154970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)