Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H11
         (1217 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          166   4e-41
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294          165   8e-41
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923          164   1e-40
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    53   5e-07
12_02_0964 - 24860373-24860381,24860427-24860768,24861436-248615...    29   9.8  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score =  166 bits (403), Expect = 4e-41
 Identities = 78/121 (64%), Positives = 96/121 (79%)
 Frame = +3

Query: 153 AAAVVSGKAIEQPQAXVSPXHRIRXTLTSRNVRSLEQVCADLINGAKXQKLRVKGPVRMP 332
           A   + G  +   +A     +RIR TL+S+NV++LE+VCADL+ GAK ++LRVKGPVR+P
Sbjct: 9   AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68

Query: 333 TKXLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 512
           TK L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEVEVTIA
Sbjct: 69  TKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIA 128

Query: 513 D 515
           D
Sbjct: 129 D 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score =  165 bits (400), Expect = 8e-41
 Identities = 82/126 (65%), Positives = 99/126 (78%), Gaps = 4/126 (3%)
 Frame = +3

Query: 150 MAAAVV----SGKAIEQPQAXVSPXHRIRXTLTSRNVRSLEQVCADLINGAKXQKLRVKG 317
           MAAA V     G  +   +A     +RIR TL+S+NV++LE+VCADL+ GAK ++LRVKG
Sbjct: 1   MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60

Query: 318 PVRMPTKXLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEV 497
           PVR+PTK L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEV
Sbjct: 61  PVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEV 120

Query: 498 EVTIAD 515
           EVTIAD
Sbjct: 121 EVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score =  164 bits (398), Expect = 1e-40
 Identities = 73/101 (72%), Positives = 90/101 (89%)
 Frame = +3

Query: 213 HRIRXTLTSRNVRSLEQVCADLINGAKXQKLRVKGPVRMPTKXLRITTRKTPCGEGSKTW 392
           HRIR TL+S++V++LE+VC DL+ GAK + L+VKGPVRMPTK L ITTRK+PCGEG+ TW
Sbjct: 27  HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEGTNTW 86

Query: 393 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 515
           DRF+MR+HKRVIDL S +++VKQITSI IEPGVEVEVTI+D
Sbjct: 87  DRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISD 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +3

Query: 201 VSPXHRIRXTLTSRNVRSLEQVCADLINGAKXQKLRVKGPVRMPTKXLRITTRKTPCGEG 380
           ++P  +IR  L S  V  +E  C  +I  AK    +  GPV +PTK        +P    
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHK 388

Query: 381 SKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 509
              +  F++R H+R+ID+  P ++ +  +  + +  GV+VEV +
Sbjct: 389 DSRF-HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>12_02_0964 -
           24860373-24860381,24860427-24860768,24861436-24861583,
           24862070-24862089
          Length = 172

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 125 SRPXFNKQHGSRCSVRQSHRATPGXGLPXPPHQXH 229
           +RP      GSR + R+  R+  G   P PPH  H
Sbjct: 90  ARPEAAAGGGSRGTARRILRSASGSATPLPPHHLH 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,280,124
Number of Sequences: 37544
Number of extensions: 329297
Number of successful extensions: 711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)