Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H11
         (1217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              26   0.77 
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              26   0.77 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   3.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   4.1  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 111 NQKLFSAEPEKPQRFKE-LLKEERAGDE 31
           N+  F  E EKPQR+ E +LK+    DE
Sbjct: 48  NEVNFDVEDEKPQRYNECILKQFNIVDE 75


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 111 NQKLFSAEPEKPQRFKE-LLKEERAGDE 31
           N+  F  E EKPQR+ E +LK+    DE
Sbjct: 48  NEVNFDVEDEKPQRYNECILKQFNIVDE 75


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 535 IGGSAYASAMVTSTSTPGS 479
           +G  +Y +A + +TSTPGS
Sbjct: 220 MGRPSYTTATMATTSTPGS 238


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 32  SSPARSSFKSSLKRXGFSGSALNNF*LKSCFSRPXFNKQH-GSRCSVRQSHRAT 190
           +SPA +S +SSL     + +A+N     +  S    + QH GS  S   + R T
Sbjct: 32  TSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTT 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,878
Number of Sequences: 438
Number of extensions: 3448
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41693346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)