Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H09
         (1217 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   2.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 392 RVVWAGRMVLVAVNHFPTRSTATRKQR 472
           R +W+   +L+ V H P R     + R
Sbjct: 231 RTIWSKSKLLIPVGHIPIRQCDDHRDR 257


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 488 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 589
           V P    N SS+     +  SS  T +W+W+++++
Sbjct: 106 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 140


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 488 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 589
           V P    N SS+     +  SS  T +W+W+++++
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 488 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 589
           V P    N SS+     +  SS  T +W+W+++++
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,892
Number of Sequences: 336
Number of extensions: 5131
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35555306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)