Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H09
(1217 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 129 7e-31
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 65 2e-11
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 43 7e-05
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 34 0.035
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 29 0.99
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 29 1.7
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 5.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 5.3
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 129 bits (312), Expect = 7e-31
Identities = 84/200 (42%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Frame = +1
Query: 457 DPKATFAQFFGSASPFQEFFDLNGG-GTTTFFDRDMDVDMDPFSNISMGQARPGG----- 618
DP F + FG A F + GG G D DMD+D F + G PGG
Sbjct: 120 DPNDIFERVFGHA--FAGGGGMGGGMGGMGGMDDDMDMD-GGFGTRTRGGGMPGGFANMF 176
Query: 619 -PGGAF----RSHSFNFHGSPSRKEKTQDPPIEHDLYVSLEDIARGCVKKMKISRRVIQQ 783
GGA RSH +F GS + Q+ I L VSLED+ GC KKMKISR +I
Sbjct: 177 GGGGAGPHARRSHP-SFGGSRPSQPPAQNEVITRPLNVSLEDLFTGCTKKMKISRHIIDA 235
Query: 784 DGTSKKEDKVLTIHVKPGWKAGTKITFXKEGDRGRNKIPAXIVFIIRDKAHPLFKRXGSD 963
G S K D++L I VKPGWKAGTKI F EGD + I F++ +K HP+F R G D
Sbjct: 236 SGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDD 295
Query: 964 IRXTAKISLKXALCGTTIEV 1023
+R ++SLK AL G + ++
Sbjct: 296 LRMQVELSLKEALLGFSKQI 315
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 64.9 bits (151), Expect = 2e-11
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Frame = +1
Query: 613 GGPGGAFRSHSFNFHGSPSRKEKTQDPPIEHDLYVSLEDIARGCVKKMKISRRVIQQDGT 792
GG G+ +S + + +GS + P+ + ++ D G + ++ R + DG
Sbjct: 144 GGKEGSVKSCA-SCNGSGVKFITRAMGPMIQRMQMTCPD-CNGAGETIRDEDRCKECDGA 201
Query: 793 SK-KEDKVLTIHVKPGWKAGTKITFXKEGDRGRNKIPAXIVFIIRDKAHPLFKRXGSDIR 969
+ K+LT+HV+ G G KI F +EG++ IP ++F+I K HP FKR G +
Sbjct: 202 KVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLF 261
Query: 970 XTAKISLKXALCGTTIEVQ 1026
A + L AL G I V+
Sbjct: 262 YEAHVDLLTALAGGQIVVE 280
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 43.2 bits (97), Expect = 7e-05
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 802 EDKVLTIHVKPGWKAGTKITFXKEGDRGRNKIPAXIVFIIRDKAHPLFKRXGSDIRXTAK 981
E ++L+ V K KI D P ++ + K HP+F+R G D++ K
Sbjct: 218 EQRMLSFFVNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLK 277
Query: 982 ISLKXALCG 1008
ISL AL G
Sbjct: 278 ISLAEALTG 286
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 670 RKEKTQDPPIEHDLYVSLEDIARGCVKKMKISRRVI 777
R K + + HD +SLED+ +G K++ +R +
Sbjct: 111 RDRKRRGSDVIHDYEISLEDMFKGKEVKLRATRNTL 146
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 34.3 bits (75), Expect = 0.035
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 844 AGTKITFXKEGDRGRNKIPAXIVFIIRDKAHPLFKRXGSDIRXTAKISLKXALCGTTIEV 1023
AG + K G +++ P + I + HP F R G+++ AKI + A G T+ V
Sbjct: 330 AGNDASTAKGGPNAKSR-PGDLFATIHVRKHPFFVREGTNVTYNAKIPMTTAALGGTLRV 388
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.99
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 477 AVLWF-GQPVPGILRSEWRWNYNV 545
A +WF G V GI+ S WRW Y +
Sbjct: 220 ATVWFTGFIVQGIIDSNWRWGYGM 243
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 921 DDKHYVCWDFITTSITFFXEGNLSSSFPARLH 826
+DK CWD T + G+LS + +LH
Sbjct: 225 EDKMVKCWDLETNKVIRHYHGHLSGVYALKLH 256
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 108 LKFRXLCFNSQGFK-FLSSNPNQNGQSLLSNLGXHK 212
L F +C NSQGF FL NP S+ ++L K
Sbjct: 596 LAFGAICLNSQGFDLFLEKNPIPQLFSIFTSLNHCK 631
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 635 RKAPPGPPGRACPMLMLLKGSISTSMSRSKNVVVPPP 525
R APP PP R+ P +S+S + S N PPP
Sbjct: 358 RSAPPPPPPRSAPSTGRQPPPLSSSRAVS-NPPAPPP 393
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,953,715
Number of Sequences: 5004
Number of extensions: 78860
Number of successful extensions: 185
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 659412242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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