Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H09
(1217 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 163 3e-40
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 69 5e-12
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical ... 31 2.2
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 30 3.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 6.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 6.7
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 8.8
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical protein
F54D5.8 protein.
Length = 331
Score = 163 bits (395), Expect = 3e-40
Identities = 107/301 (35%), Positives = 132/301 (43%)
Frame = +1
Query: 175 MGKASSQILGXTXXXXXXXXXXXXXXXXXXXHPDXXXXXXXXXXXXXXXXAYXVLSDKXX 354
MGK ++LG + HPD AY VLSD
Sbjct: 1 MGKDYYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKK 60
Query: 355 XXIYXAHXXXXXXXXXXXXXXXXXXQSFSYTFHGDPKATFAQFFGSASPFQEFFDLNGGG 534
IY Y F GDP F+ FFG + PF G G
Sbjct: 61 KKIYDQFGEEGLKEGGPGAGGGGGG-GMHYEFRGDPMNIFSSFFGGSDPF-------GAG 112
Query: 535 TTTFFDRDMDVDMDPFSNISMGQARPGGPGGAFRSHSFNFHGSPSRKEKTQDPPIEHDLY 714
FD ++ G G GG H R QDP + HDL
Sbjct: 113 GPGMFDLGGGAGGPNMFFMNQGGMDDGMFGG--------MHQGGRRGHARQDPAVLHDLS 164
Query: 715 VSLEDIARGCVKKMKISRRVIQQDGTSKKEDKVLTIHVKPGWKAGTKITFXKEGDRGRNK 894
VSLED+ +G KKMKI+R+V+ D + EDKVLT+ +KPGWK+GTKITF KEGD+ N+
Sbjct: 165 VSLEDVLKGTTKKMKITRKVMT-DNAQRLEDKVLTVTIKPGWKSGTKITFPKEGDQHPNR 223
Query: 895 IPAXIVFIIRDKAHPLFKRXGSDIRXTAKISLKXALCGTTIEVQLCLXKSXSQXXGEIXK 1074
PA IVF+I+DK HP FKR GSDI+ KISLK AL G I + ++ K
Sbjct: 224 TPADIVFVIKDKPHPKFKREGSDIKRVEKISLKSALTGLDIMIPTLDGADYRLQLNDVIK 283
Query: 1075 P 1077
P
Sbjct: 284 P 284
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 69.3 bits (162), Expect = 5e-12
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +1
Query: 808 KVLTIHVKPGWKAGTKITFXKEGDRGR-NKIPAXIVFIIRDKAHPLFKRXGSDIRXTAKI 984
K+L +HV PG K KITF +GD+ + P +V +I+ K H +FKR G D+ T K+
Sbjct: 241 KILEVHVLPGMKHNDKITFKGDGDQSDPDGEPGDVVIVIQQKDHDIFKRDGDDLHMTKKL 300
Query: 985 SLKXALCGTTIEVQLCLXKS--XSQXXGEIXKPXXVKG 1092
SL ALCG ++ S G++ KP ++G
Sbjct: 301 SLNEALCGYNFLIKHLDGHPLVLSSKQGDVIKPGVIRG 338
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical protein
F39B2.10 protein.
Length = 402
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 799 KEDKVLTIHVKPGWKAGTKITFXKEGDR--GRNKIPAXIVFIIRDKAHPLFKRXGSDIRX 972
KED+++ + + PG K G K F +GD G K P V ++ + H F R G ++
Sbjct: 204 KEDEIIEVGITPGMKDGEKFVFEGKGDEVIGIEK-PGDFVVVLDEVEHEKFVRKGDNLII 262
Query: 973 TAKISLKXALCG 1008
I L ALCG
Sbjct: 263 QHNIDLSEALCG 274
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +1
Query: 601 QARPGGPGGAFRSHS--------FNFHGSPSRKEKTQDPPIEHDLYVSLEDIARGCVKKM 756
+A GG GG H+ F G R E+ P + H+L V+L+ + +G KK+
Sbjct: 70 EALQGGGGGGEGFHNPFDVFDMFFGGGGRGGRGERRVKPTV-HNLRVTLDTLYKGVTKKL 128
Query: 757 KISR 768
KISR
Sbjct: 129 KISR 132
>AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical
protein Y61A9LA.8 protein.
Length = 740
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 601 QARPGGPGGAFRSHSFNFHGSPSRKEKTQDPPIEHDLYVSLEDIAR 738
+A P P +S + SR KT +PPIE D V LED A+
Sbjct: 277 EALPSKPAST-KSPKKSIRDRMSRISKTSEPPIEEDDAVVLEDFAQ 321
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 29.9 bits (64), Expect = 3.8
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 19/95 (20%)
Frame = +1
Query: 433 SFSYTFHGDPKATFAQFFGSASPFQEFFD--------LNGGGTT---TFFDRDMD----- 564
+FS+ F G+ K T A G F FD N GG+T F + D +
Sbjct: 494 NFSFNFFGNSKGTSAGEGGGEGNFDFNFDGIGAGDDGSNNGGSTGDLDFLNYDGEDEGKG 553
Query: 565 ---VDMDPFSNISMGQARPGGPGGAFRSHSFNFHG 660
DPF S G A GG G+F +FNF G
Sbjct: 554 SGNTQSDPFGFASNGNAAGGGGDGSF---NFNFDG 585
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Frame = +2
Query: 419 LVAVNHFPTRSTATRK---------QRSRSSLVRPARSRNSSI*MEVELQRSSTATWMW 568
++ +NHF R+TA RK + L + NSS +EV LQ ++ A WM+
Sbjct: 1883 MLVINHFKDRATACRKAVIDCMGTMDYETAELYLDSVKINSSSQVEVSLQCTNNAVWMY 1941
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Frame = +2
Query: 419 LVAVNHFPTRSTATRK---------QRSRSSLVRPARSRNSSI*MEVELQRSSTATWMW 568
++ +NHF R+TA RK + L + NSS +EV LQ ++ A WM+
Sbjct: 1883 MLVINHFKDRATACRKAVIDCMGTMDYETAELYLDSVKINSSSQVEVSLQCTNNAVWMY 1941
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Frame = +2
Query: 419 LVAVNHFPTRSTATRK---------QRSRSSLVRPARSRNSSI*MEVELQRSSTATWMW 568
++ +NHF R+TA RK + L + NSS +EV LQ ++ A WM+
Sbjct: 1883 MLVINHFKDRATACRKAVIDCMGTMDYETAELYLDSVKINSSSQVEVSLQCTNNAVWMY 1941
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Frame = +2
Query: 419 LVAVNHFPTRSTATRK---------QRSRSSLVRPARSRNSSI*MEVELQRSSTATWMW 568
++ +NHF R+TA RK + L + NSS +EV LQ ++ A WM+
Sbjct: 1883 MLVINHFKDRATACRKAVIDCMGTMDYETAELYLDSVKINSSSQVEVSLQCTNNAVWMY 1941
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 28.7 bits (61), Expect = 8.8
Identities = 25/92 (27%), Positives = 36/92 (39%)
Frame = -1
Query: 794 EVPSCCITRRDIFIFLTQPRAISSNDTYKSCSMGGSCVFSFLLGEPWKLKL*LRKAPPGP 615
++ C + RDIF + RA +N T + G C L G PG
Sbjct: 49 QISFCKHSARDIFSEVNHIRASPNNATLREKRQAGDCSGCCLPGAAGPAG---TPGKPGR 105
Query: 614 PGRACPMLMLLKGSISTSMSRSKNVVVPPPFR 519
PGR P L G+ ++ + + PPP R
Sbjct: 106 PGR--PGAAGLPGNPGRPPAQPCDPITPPPCR 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,528,392
Number of Sequences: 27780
Number of extensions: 487043
Number of successful extensions: 1448
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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