Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H07
(1324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.45
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.45
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.60
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.60
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.60
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.79
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.79
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 4.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.7
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.11
Identities = 29/107 (27%), Positives = 29/107 (27%)
Frame = -1
Query: 1084 GXGGXXXGXXPGGXXXXXXPXXGXGXPXXGXXXXXXXRXXXXXXXXGXPXGGXXXGXGXX 905
G GG G GG G G G GG G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 904 XXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGG 764
GG GG G G G G PP A G G G GG
Sbjct: 83 GGCGGG--GGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 127
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.45
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +2
Query: 701 PXTGXQPXXXPGXXXXXRXAPXPXTXXXXXXGXXXRWXPPXAXXXXPXRXPPXXPPRXXP 880
P P PG P P G PP P PP PPR
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
Query: 881 XXPXXXXXPXXXAXPXPP 934
P P P PP
Sbjct: 358 AGPGMYPPPPPSRPPAPP 375
Score = 29.9 bits (64), Expect = 4.2
Identities = 25/104 (24%), Positives = 25/104 (24%)
Frame = +2
Query: 809 WXPPXAXXXXPXRXPPXXPPRXXPXXPXXXXXPXXXAXPXPPXXXXXXXXPXXXXXXXXP 988
W PP PP P P P P P PP P P
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-------PPGMRYPGGMP 348
Query: 989 XXPXXXXXXXXXGXXXPPXPPXXXXXPXXPXXPPXXXGXXXPXP 1120
P G PP P P PP G P P
Sbjct: 349 PPPPPRYPSAGPGMYPPP-------PPSRPPAPPSGHGMIPPPP 385
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 774 PXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAP--PXXPPXXXXXXPXP 920
P P P GG P P P P P P P PP P P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.45
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +2
Query: 701 PXTGXQPXXXPGXXXXXRXAPXPXTXXXXXXGXXXRWXPPXAXXXXPXRXPPXXPPRXXP 880
P P PG P P G PP P PP PPR
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
Query: 881 XXPXXXXXPXXXAXPXPP 934
P P P PP
Sbjct: 368 AGPGMYPPPPPSRPPAPP 385
Score = 29.9 bits (64), Expect = 4.2
Identities = 25/104 (24%), Positives = 25/104 (24%)
Frame = +2
Query: 809 WXPPXAXXXXPXRXPPXXPPRXXPXXPXXXXXPXXXAXPXPPXXXXXXXXPXXXXXXXXP 988
W PP PP P P P P P PP P P
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP-------PPGMRYPGGMP 358
Query: 989 XXPXXXXXXXXXGXXXPPXPPXXXXXPXXPXXPPXXXGXXXPXP 1120
P G PP P P PP G P P
Sbjct: 359 PPPPPRYPSAGPGMYPPP-------PPSRPPAPPSGHGMIPPPP 395
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +3
Query: 774 PXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAP--PXXPPXXXXXXPXP 920
P P P GG P P P P P P P PP P P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 876 PPXXPPXXXXXXPXPXXXPPXGXPXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPG 1055
PP PP P P PP G P P G P P PPG
Sbjct: 716 PPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP------PPPG 766
Query: 1056 XXPXXXPPXPXXXXXXXXXPXP 1121
P PP P P P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +1
Query: 751 PXGXXPLXXXXPXPXXXSXVATPXRXXXXXXXXXPXXXPXXX--PPXPXPXPXXXXPRPP 924
P G P+ P P + P P P PP P P P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 925 XXPXXGXRGXLP 960
P G +G P
Sbjct: 774 PPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 876 PPXXPPXXXXXXPXPXXXPPXGXPXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPG 1055
PP PP P P PP G P P G P P PPG
Sbjct: 716 PPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP------PPPG 766
Query: 1056 XXPXXXPPXPXXXXXXXXXPXP 1121
P PP P P P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +1
Query: 751 PXGXXPLXXXXPXPXXXSXVATPXRXXXXXXXXXPXXXPXXX--PPXPXPXPXXXXPRPP 924
P G P+ P P + P P P PP P P P P PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 925 XXPXXGXRGXLP 960
P G +G P
Sbjct: 774 PPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 876 PPXXPPXXXXXXPXPXXXPPXGXPXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPG 1055
PP PP P P PP G P P G P P PPG
Sbjct: 299 PPGLPPITGGPPPPP---PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP------PPPG 349
Query: 1056 XXPXXXPPXPXXXXXXXXXPXP 1121
P PP P P P
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +1
Query: 751 PXGXXPLXXXXPXPXXXSXVATPXRXXXXXXXXXPXXXPXXX--PPXPXPXPXXXXPRPP 924
P G P+ P P + P P P PP P P P P PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGL--PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 925 XXPXXGXRGXLP 960
P G +G P
Sbjct: 357 PPPPGGFKGGPP 368
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.79
Identities = 28/108 (25%), Positives = 28/108 (25%)
Frame = -1
Query: 1084 GXGGXXXGXXPGGXXXXXXPXXGXGXPXXGXXXXXXXRXXXXXXXXGXPXGGXXXGXGXX 905
G GG G GG G G GG G G
Sbjct: 62 GRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNN 121
Query: 904 XXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGGR 761
GG GG G G G GRG P G G GGR
Sbjct: 122 DGGWGGNNGGGGGGRGGGGRGGD----GRGPPGSNGGGDWGGNGGGGR 165
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.79
Identities = 24/105 (22%), Positives = 25/105 (23%)
Frame = +3
Query: 765 PPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPPXXPPXXXXXXPXPXXXPPXGX 944
PP S P G P P P P P P P P PP G
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 945 PXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPGXXPXXXPP 1079
P + G P P P P PP
Sbjct: 307 PPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP 350
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 851 PPXXPPRXXPXXPXXXXXPXXXAXPXPPXXXXXXXXPXXXXXXXXPXXPXXXXXXXXXGX 1030
PP PP+ P P A PP P P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAG 295
Query: 1031 XXPPXPPXXXXXPXXPXXPPXXXGXXXP 1114
PP PP P PP G P
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 756 GXRPPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPP--XXPPXXXXXXPXP 920
G PP P P G P PR P P P +PP PP P P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.79
Identities = 24/105 (22%), Positives = 25/105 (23%)
Frame = +3
Query: 765 PPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPPXXPPXXXXXXPXPXXXPPXGX 944
PP S P G P P P P P P P P PP G
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 945 PXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPGXXPXXXPP 1079
P + G P P P P PP
Sbjct: 328 PPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP 371
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 851 PPXXPPRXXPXXPXXXXXPXXXAXPXPPXXXXXXXXPXXXXXXXXPXXPXXXXXXXXXGX 1030
PP PP+ P P A PP P P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAG 316
Query: 1031 XXPPXPPXXXXXPXXPXXPPXXXGXXXP 1114
PP PP P PP G P
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 756 GXRPPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPP--XXPPXXXXXXPXP 920
G PP P P G P PR P P P +PP PP P P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.79
Identities = 24/105 (22%), Positives = 25/105 (23%)
Frame = +3
Query: 765 PPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPPXXPPXXXXXXPXPXXXPPXGX 944
PP S P G P P P P P P P P PP G
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 945 PXXXXXXXXRXXXXXXXPXXGXPXPXXGXXXXXXPPGXXPXXXPP 1079
P + G P P P P PP
Sbjct: 313 PPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP 356
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 851 PPXXPPRXXPXXPXXXXXPXXXAXPXPPXXXXXXXXPXXXXXXXXPXXPXXXXXXXXXGX 1030
PP PP+ P P A PP P P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAG 301
Query: 1031 XXPPXPPXXXXXPXXPXXPPXXXGXXXP 1114
PP PP P PP G P
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 756 GXRPPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPP--XXPPXXXXXXPXP 920
G PP P P G P PR P P P +PP PP P P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPP---PPPPPRGSPPTGSLPPPQAGGSPPP 329
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -1
Query: 946 GXPXGGXXXGXGXXXXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXG 767
G P G G G GG GG G G G G G G G G
Sbjct: 780 GGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNG 839
Query: 766 G 764
G
Sbjct: 840 G 840
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = +3
Query: 765 PPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXA--PPXXPPXXXXXXP-XPXXXPP 935
PP P P P + G P P P P P PP P P P PP
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 936 XGXP 947
P
Sbjct: 187 PRMP 190
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = +3
Query: 765 PPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXA--PPXXPPXXXXXXP-XPXXXPP 935
PP P P P + G P P P P P PP P P P PP
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 936 XGXP 947
P
Sbjct: 187 PRMP 190
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 810 GXPRPRXXXXPXXXPXXXPXXAPPXXPPXXXXXXPXPXXXPP 935
G PRP P P P PP P P P PP
Sbjct: 72 GAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPP 113
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -1
Query: 934 GGXXXGXGXXXXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGGR 761
GG G GG GG G G G RG G G G GG+
Sbjct: 39 GGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQ 96
Score = 28.7 bits (61), Expect = 9.7
Identities = 25/108 (23%), Positives = 27/108 (25%)
Frame = -1
Query: 1084 GXGGXXXGXXPGGXXXXXXPXXGXGXPXXGXXXXXXXRXXXXXXXXGXPXGGXXXGXGXX 905
G GG G GG G G G GG G
Sbjct: 147 GWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGG 206
Query: 904 XXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGGR 761
G GG+ G G G G+ G G G GGR
Sbjct: 207 EQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGR 254
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.9 bits (64), Expect = 4.2
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = -1
Query: 1084 GXGGXXXGXXPGGXXXXXXPXXGXGXPXXGXXXXXXXRXXXXXXXXGXPXGGXXXGXGXX 905
G GG G GG G G G G GG G G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGR--GGGGGGGGGR 104
Query: 904 XXXXGGXXGGAXXGXXXGXXXGXXXXRGRG 815
GG GG G G G GRG
Sbjct: 105 GGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +3
Query: 756 GXRPPXPXSPXPXAXXXGGXPRPRXXXXPXXXPXXXPXXAPPXXPPXXXXXXPXPXXXPP 935
G PP P P P PR P P PP P P PP
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -1
Query: 940 PXGGXXXGXGXXXXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGG 764
P GG G G GG GG G G G G G G G G GG
Sbjct: 78 PCGGGCGGGG---GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -1
Query: 940 PXGGXXXGXGXXXXXXGGXXGGAXXGXXXGXXXGXXXXRGRGXPPXXXAXGXGXXGXGG 764
P GG G G GG GG G G G G G G G G GG
Sbjct: 78 PCGGGCGGGG---GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,734,188
Number of Sequences: 27780
Number of extensions: 173398
Number of successful extensions: 879
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3704777368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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