Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H06
         (1153 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    29   0.088
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    29   0.088
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.82 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   1.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 0.088
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 70  LISHVSRYRLVNLVLQIK------NETKMSIFGDXLNKNEQKNNQASANLSPYLNFDPHY 231
           LI   S+Y+ V LVLQ++      N T  S F D  NK + K  Q S NL  Y+    HY
Sbjct: 183 LIKAFSKYQFVVLVLQLQHRFGKINRTMRSFFSD--NKQDDKIPQISDNL--YILCRLHY 238


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 0.088
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 70  LISHVSRYRLVNLVLQIK------NETKMSIFGDXLNKNEQKNNQASANLSPYLNFDPHY 231
           LI   S+Y+ V LVLQ++      N T  S F D  NK + K  Q S NL  Y+    HY
Sbjct: 183 LIKAFSKYQFVVLVLQLQHRFGKINRTMRSFFSD--NKQDDKIPQISDNL--YILCRLHY 238


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.4 bits (53), Expect = 0.82
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 513 WGNLASRQRRHSKHFHSSLNHWYHLQK 593
           WG+   +  RH +HF SS  +  H +K
Sbjct: 83  WGD-GDKHDRHERHFESSFGNNLHSEK 108


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 566 AAMKVFAVSSLSRSQVTPRAMHE*NDAIIPSVQPVVVPCFIT 441
           A +K+     L+R +   + +H  N  I   V+P  V C+IT
Sbjct: 488 APVKISVQEVLNRVRKPTKKLHLKNSPISKKVRPPQVLCYIT 529


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/49 (22%), Positives = 24/49 (48%)
 Frame = +3

Query: 486 CIVLLMHSPWGNLASRQRRHSKHFHSSLNHWYHLQKHIWSSFNGSWCSY 632
           C +LLM S   N++S + ++ +    +  + + +Q++ W   N     Y
Sbjct: 8   CCLLLMFSYTDNVSSTRTKYLRTNFPNFYNDFEVQRYTWKCENQKCVKY 56


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 166 NEQKNNQASANLSPYLNFDPHYIPRMQPEFLYPDDSHMASTARRSNVALPIIGMSFMTGS 345
           N   +N +S N     N+ P Y  +MQP++L     +  +T         + G   MTG 
Sbjct: 289 NGHGHNTSSHNYYAQ-NYAPTYYGQMQPDYL-----NSQTTQNHMQAMNNMAGTYQMTGY 342

Query: 346 GLGGMA 363
              GMA
Sbjct: 343 SAMGMA 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,799
Number of Sequences: 336
Number of extensions: 4384
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33506525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)