Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H05
(1188 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 34 0.045
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.41
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 30 0.55
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.9
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 5.1
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 5.1
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 5.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 5.1
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 6.8
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 8.9
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 8.9
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 26 8.9
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.045
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 457 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 627
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 628 DVDVGLETAQKTNEIAKAVEATTYAVNIRDDAEFLPI 738
DVD+ LET +K ++ E Y N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.41
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -2
Query: 725 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 546
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 545 LLLSS 531
SS
Sbjct: 315 SSFSS 319
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 30.3 bits (65), Expect = 0.55
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 214 SLWSNLANEMQHLDDMMKELSLKFPSIINEGRV 312
+L S L LDD+ K L+L FP++I + RV
Sbjct: 167 ALQSQLVRVNGELDDLQKHLTLSFPTLIAKSRV 199
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -2
Query: 710 MLTAYVVASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 537
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 5.1
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -2
Query: 689 ASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGC----F 522
AS +F+ S + W S+T S N+ G+ A GLL GC F
Sbjct: 343 ASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGLLTPIGCSPKKF 402
Query: 521 CFSGKVIFNTSFS 483
FS +V FN S S
Sbjct: 403 AFS-EVPFNDSNS 414
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +1
Query: 544 RPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTYAVNIRDDA 723
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 724 E 726
E
Sbjct: 178 E 178
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 193 ESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 372
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 373 VKAKN 387
K N
Sbjct: 163 SKKLN 167
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 5.1
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -2
Query: 743 YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVS 564
Y + ++S +S++ AY+ S + S V ++ PTS+S + V S+ R + G S
Sbjct: 387 YSVVQSSLASIISNAYIATSKSGLNSGVSTLLASPTSSS----TFVTSLLRRSSIDGSAS 442
Query: 563 VGSAT 549
SA+
Sbjct: 443 SSSAS 447
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 105 AAVSAAPQYYHGSSHWPYHHYDPXQSL 185
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 725 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTS 627
S S+ + +A+T+F SLV A + P+STS
Sbjct: 463 SVSATPTVSMSIAATSFGSSLVLTASASPSSTS 495
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 8.9
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 481 YEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQK 660
Y V ++ P Q + + +ET P+ S E F T S + + E
Sbjct: 986 YTSAVTELPDPNHQLEMSTTTHVQHPNSETIPS--STENQYFDTTSGAFEANSNTEVTVN 1043
Query: 661 TNEIAKAVEATTYAVNIRDDAEFLPI 738
+NE+++ + T + DD E LP+
Sbjct: 1044 SNEVSQPFDFDTANESDNDDDE-LPV 1068
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +1
Query: 436 IQNLPWDVNSEGSW---VYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEF 606
+ N+P +V +E S ++KDV + L + E+ + + + + +S ++ E
Sbjct: 29 VSNVPNEVETESSSHEPSFKKDVDEEIPSLTAELSEEEEGEYSSESGRSTPELSPDDFED 88
Query: 607 TT-ESNVRDVDVGLETAQKTNEIAKAVEATTYAVNI 711
E ++D G + T ++A + + Y N+
Sbjct: 89 ADDEEEFEEIDAGYSSDSSTEDVAPGLYESPYDENL 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,221,040
Number of Sequences: 5004
Number of extensions: 66999
Number of successful extensions: 226
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 639490422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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