Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_H05
(1188 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.40
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.40
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.40
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.40
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.91
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 32 0.91
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 30 3.7
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 29 4.9
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 29 4.9
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 29 6.4
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 6.4
U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical pr... 29 6.4
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 6.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 6.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 6.4
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 29 6.4
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 29 8.5
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 29 8.5
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 36.3 bits (80), Expect = 0.042
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 84 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDPXQSLRSGKHVGHTFALVQPCQRNATLGRHD 263
L LC LLA SA YY S + PY++Y P + V T + Q Q G
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYPTAA------VAGTTGVAQQTQAG---GASQ 55
Query: 264 EGAVVEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQR 374
+ + PQ ++ +G +Q Y P + + Q+
Sbjct: 56 QAYAQQQPQQNQQYAQGTQQQQQQYYPQQTQQGQQQQ 92
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.40
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 406 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTPTN 582
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 583 VSREEMEFTTESNVRDVDVGLETAQKTNEIAKA 681
V ++ T + TA + +A A
Sbjct: 369 VEDDDSSSTITQFESSFNKPKTTAPRLAPVAAA 401
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.1 bits (72), Expect = 0.40
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 463 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 639
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 640 GLETAQKTNEI 672
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 484 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 660
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 661 TNEI 672
E+
Sbjct: 3508 QQEV 3511
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.1 bits (72), Expect = 0.40
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 463 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 639
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 640 GLETAQKTNEI 672
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 484 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 660
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 661 TNEI 672
E+
Sbjct: 3508 QQEV 3511
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.1 bits (72), Expect = 0.40
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 463 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDV 639
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 640 GLETAQKTNEI 672
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.3 bits (70), Expect = 0.69
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 484 EKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEM-EFTTESNVRDVDVGLETAQK 660
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 661 TNEI 672
E+
Sbjct: 3508 QQEV 3511
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.91
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 526 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 422
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.91
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -2
Query: 665 LVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVG---SATGLLLSSGCFCFSG--KVI 501
L+ A +KP + +VVNSI G++SVG S TGL+L FSG KV
Sbjct: 407 LIKLAAAKPHDRKKITDTVVNSIGLASEPKGIISVGAPESVTGLVLPKPDIYFSGGKKVF 466
Query: 500 FN 495
+N
Sbjct: 467 WN 468
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.9 bits (64), Expect = 3.7
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 752 SN*YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSR--LTF 579
SN Y NS S LT + A T + F+A T+ T SV+N++SS+ LT
Sbjct: 75 SNAYTSPTNSFGSAPLTTQINAFTQNPNGVNFYAELIFPDTTATPASVINALSSQGYLTN 134
Query: 578 VGVVSVGSATGLL 540
V S +GL+
Sbjct: 135 AFVSSTSQCSGLI 147
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 511 PLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTES 618
P+ P + AEPT TTP S + ++F ES
Sbjct: 64 PMTTLPPSTTTSTTAEPTTTTPLKSSTDSVDFDEES 99
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 472 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDV 633
SW Y +KD + F +++ E+ K+PV + + N E+E T + +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 623 TLLSVVNSISSRLTF---VGVVSVGSATGLLLSSGCFCFSGKVI 501
T+ +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 535 DSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 669
D +P E PTN +EMEF E +R+ + +E A++ E
Sbjct: 1073 DEAQPTDEIRRAQPTNEMDKEMEF--EKRIREQRIQMEQAKRLRE 1115
>U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical
protein F20B4.3 protein.
Length = 479
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 550 VAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKT 663
++ PT +P N+ R F+T + +RD DV + Q T
Sbjct: 28 LSHPTRDSPINMYRTASPFSTVTRIRDSDVDRWSHQST 65
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 490 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 591
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 490 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 591
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 490 DVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSR 591
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 517 KQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 669
+ K+P+ +K T T + EE TTE +V D++ ++ E
Sbjct: 215 RSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLETQAPNVEEVTE 265
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical protein
C50H2.1 protein.
Length = 929
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 51 RVVERSTRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPXQSLRSGKHVGHT-FALVQ 227
RV ++ +I + G L A S+ +YH + + SG H+ T +
Sbjct: 701 RVRSKTLPVIRRITTGPLNAASSLSNFYHSQPPGAHRRSRDEPTSPSGMHLAVTQTTSLN 760
Query: 228 PCQRNATLGRHDEGAVVEVPQHYKRRTRGRRQVS-DI-YSPAWLRTERHQRES 380
R + + R +G + + Y RR +VS DI SP R++R R S
Sbjct: 761 STPRGSDVSRASDGMLFD----YDRRASASPRVSFDIPISPTTPRSDRKNRIS 809
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 28.7 bits (61), Expect = 8.5
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 51 RVVERSTRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPXQSLRSGKHVGHT-FALVQ 227
RV ++ +I + G L A S+ +YH + + SG H+ T +
Sbjct: 701 RVRSKTLPVIRRITTGPLNAASSLSNFYHSQPPGAHRRSRDEPTSPSGMHLAVTQTTSLN 760
Query: 228 PCQRNATLGRHDEGAVVEVPQHYKRRTRGRRQVS-DI-YSPAWLRTERHQRES 380
R + + R +G + + Y RR +VS DI SP R++R R S
Sbjct: 761 STPRGSDVSRASDGMLFD----YDRRASASPRVSFDIPISPTTPRSDRKNRIS 809
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,921,534
Number of Sequences: 27780
Number of extensions: 383536
Number of successful extensions: 1296
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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