Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H04
         (1170 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S. cerevis...   124   5e-28
BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.      124   5e-28
BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.      124   5e-28
BC017724-1|AAH17724.1|  378|Homo sapiens FIP1L1 protein protein.      124   5e-28
AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processi...   124   5e-28
AY229892-1|AAP69563.1|  849|Homo sapiens FIP1L1/PDGFRA fusion pr...   124   5e-28

>BC110383-1|AAI10384.1|  594|Homo sapiens FIP1 like 1 (S.
           cerevisiae) protein.
          Length = 594

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 77  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197


>BC052959-1|AAH52959.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 65  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 114

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 115 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 172

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 173 WKAYCEKQKRIRM 185


>BC024016-1|AAH24016.1|  559|Homo sapiens FIP1L1 protein protein.
          Length = 559

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 65  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 114

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 115 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 172

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 173 WKAYCEKQKRIRM 185


>BC017724-1|AAH17724.1|  378|Homo sapiens FIP1L1 protein protein.
          Length = 378

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 62  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 111

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 112 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 169

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 170 WKAYCEKQKRIRM 182


>AY366510-1|AAQ88277.1|  594|Homo sapiens pre-mRNA 3'end processing
           factor FIP1 protein.
          Length = 594

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 77  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197


>AY229892-1|AAP69563.1|  849|Homo sapiens FIP1L1/PDGFRA fusion
           protein protein.
          Length = 849

 Score =  124 bits (300), Expect = 5e-28
 Identities = 67/133 (50%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = +2

Query: 365 EVTREDQNGDADSQENGXXXXXXXXXVKVTIGEIKSGS-QYASLNIKRGVGLVASAGGPE 541
           +VT  + + D+DS ++          V VTIG+IK+G+ QY S      V L    GG  
Sbjct: 77  KVTETEDDSDSDSDDD-------EDDVHVTIGDIKTGAPQYGSYGTAP-VNLNIKTGG-- 126

Query: 542 KPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDYFNYGFNEVT 721
             R   TT  KV   DL+ PGSINGVP LE ++D+ EDKPW KPGAD+SDYFNYGFNE T
Sbjct: 127 --RVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDT 184

Query: 722 WSAYCERQRRMRI 760
           W AYCE+Q+R+R+
Sbjct: 185 WKAYCEKQKRIRM 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,100,422
Number of Sequences: 237096
Number of extensions: 3475060
Number of successful extensions: 11980
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11955
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16348730310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)