Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_H02
         (1160 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.       136   2e-33
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          29   0.34 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   1.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            27   1.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   7.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   9.7  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   9.7  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score =  136 bits (328), Expect = 2e-33
 Identities = 67/70 (95%), Positives = 67/70 (95%)
 Frame = +1

Query: 184 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 363
           VLRDNIQG TKPAIRRLARRGGVKRISGLIYEE RGVLKVFLENVIRDAV YTEHAKRKT
Sbjct: 22  VLRDNIQGTTKPAIRRLARRGGVKRISGLIYEERRGVLKVFLENVIRDAVAYTEHAKRKT 81

Query: 364 VTAMDVVYAL 393
           VTAMDVVYAL
Sbjct: 82  VTAMDVVYAL 91


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 28.7 bits (61), Expect = 0.34
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = -3

Query: 318 HVFEEHFENAAGLFVYKTGDTF---HSTSASQTTDSRFRDALDVITQHLPVTFSA 163
           H    H +N    FV    DT    HS    Q  D+R R  L  ++ + P T +A
Sbjct: 658 HHHHHHHQNPNDHFVNTNTDTIKRSHSAQLPQREDARSRTPLTAVSDYSPATAAA 712


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 320 ITFSRNTLRTPRVSSYIRPEIRFTPPLRAKRRIAGF 213
           +TFS  T  TP+  S  + E  +T    A RR  GF
Sbjct: 236 VTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGF 271


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 320 ITFSRNTLRTPRVSSYIRPEIRFTPPLRAKRRIAGF 213
           +TFS  T  TP+  S  + E  +T    A RR  GF
Sbjct: 236 VTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGF 271


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 279 FVYKTGDTFHSTSASQTTDSRFRDALDVITQHLPVTFSAPLSK 151
           ++ K G +F  T  S  ++ +        T+ + VTF+ PL++
Sbjct: 489 YLIKDGSSFPLTITSNDSNEQIITFSTASTEQMTVTFNRPLNQ 531


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 279 FVYKTGDTFHSTSASQTTDSRFRDALDVITQHLPVTFSAPLSK 151
           ++ K G +F  T  S  ++ +        T+ + VTF+ PL++
Sbjct: 490 YLIKDGSSFPLTITSNDSNEQIITFSTASTEQMTVTFNRPLNQ 532


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 219  RFRDALDVITQHLPVTFSAPLSKTFASF 136
            R RD L + T+H   TF+ P+   F  F
Sbjct: 922  RPRDPLSIETRHTLYTFNDPILSCFRLF 949


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 193 DNIQGITKPAIRRLARRGGVKRISGLIYEETRG 291
           D++     P   R+AR  G    SGL Y  +RG
Sbjct: 371 DSVDSAKFPPSFRIARSYGSSNRSGLRYRSSRG 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,901
Number of Sequences: 2352
Number of extensions: 11500
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130799040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)