Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_G24
(1130 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074847-1|BAC11241.1| 432|Homo sapiens protein ( Homo sapiens ... 38 0.067
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 36 0.36
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 36 0.36
BC021134-1|AAH21134.1| 903|Homo sapiens centrobin, centrosomal ... 36 0.36
BC014055-1|AAH14055.3| 805|Homo sapiens CNTROB protein protein. 36 0.36
AY160227-1|AAO22136.1| 925|Homo sapiens centrobin beta protein. 36 0.36
AY160226-1|AAO22135.1| 903|Homo sapiens centrobin alpha protein. 36 0.36
AL022238-5|CAI18985.1| 931|Homo sapiens megakaryoblastic leukem... 36 0.36
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein. 36 0.36
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein. 36 0.36
AJ297258-1|CAC38827.1| 931|Homo sapiens megacaryocytic acute le... 36 0.36
AJ297257-1|CAC38826.1| 931|Homo sapiens megacaryocytic acute le... 36 0.36
AF368061-1|AAK54721.1| 931|Homo sapiens megakaryoblastic leukem... 36 0.36
AB037859-1|BAA92676.2| 1075|Homo sapiens KIAA1438 protein protein. 36 0.36
AF331638-1|AAL56068.2| 903|Homo sapiens PP1221 protein. 35 0.63
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 34 1.1
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 34 1.1
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 34 1.1
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 34 1.1
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 33 1.4
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 33 1.4
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 33 1.4
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 33 1.4
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 33 1.4
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 33 1.4
AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein. 33 1.9
U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain... 33 2.5
U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain... 33 2.5
AJ401189-1|CAC37685.1| 817|Homo sapiens neurabin II protein pro... 33 2.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 3.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 3.3
AK022964-1|BAB14334.1| 802|Homo sapiens protein ( Homo sapiens ... 31 7.7
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.7
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.7
>AK074847-1|BAC11241.1| 432|Homo sapiens protein ( Homo sapiens
cDNA FLJ90366 fis, clone NT2RP2004141. ).
Length = 432
Score = 37.9 bits (84), Expect = 0.067
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
+R+ ++Q+ QQ L+E+ +++ +A D Q S + +PQ P P P
Sbjct: 98 ARVCELQSGNQQ--LEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPQAPPAGPSSP 155
Query: 579 GKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
G EERR + L+P+ R R LP
Sbjct: 156 GPQEPEKEERRVWTMPPMAVALKPVLQQSREARDELP 192
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>BC021134-1|AAH21134.1| 903|Homo sapiens centrobin, centrosomal
BRCA2 interacting protein protein.
Length = 903
Score = 35.5 bits (78), Expect = 0.36
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
+R+ ++Q+ QQ L+E+ +++ +A D Q S + +P P P P
Sbjct: 530 ARVCELQSGNQQ--LEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSP 587
Query: 579 GKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
G EERR + L+P+ R R LP
Sbjct: 588 GPQEPEKEERRVWTMPPMAVALKPVLQQSREARDELP 624
>BC014055-1|AAH14055.3| 805|Homo sapiens CNTROB protein protein.
Length = 805
Score = 35.5 bits (78), Expect = 0.36
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
+R+ ++Q+ QQ L+E+ +++ +A D Q S + +P P P P
Sbjct: 431 ARVCELQSGNQQ--LEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSP 488
Query: 579 GKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
G EERR + L+P+ R R LP
Sbjct: 489 GPQEPEKEERRVWTMPPMAVALKPVLQQSREARDELP 525
>AY160227-1|AAO22136.1| 925|Homo sapiens centrobin beta protein.
Length = 925
Score = 35.5 bits (78), Expect = 0.36
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
+R+ ++Q+ QQ L+E+ +++ +A D Q S + +P P P P
Sbjct: 530 ARVCELQSGNQQ--LEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSP 587
Query: 579 GKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
G EERR + L+P+ R R LP
Sbjct: 588 GPQEPEKEERRVWTMPPMAVALKPVLQQSREARDELP 624
>AY160226-1|AAO22135.1| 903|Homo sapiens centrobin alpha protein.
Length = 903
Score = 35.5 bits (78), Expect = 0.36
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
+R+ ++Q+ QQ L+E+ +++ +A D Q S + +P P P P
Sbjct: 530 ARVCELQSGNQQ--LEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSP 587
Query: 579 GKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
G EERR + L+P+ R R LP
Sbjct: 588 GPQEPEKEERRVWTMPPMAVALKPVLQQSREARDELP 624
>AL022238-5|CAI18985.1| 931|Homo sapiens megakaryoblastic leukemia
(translocation) 1 protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
Length = 1883
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 1626 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 1677
Query: 690 NGY 698
GY
Sbjct: 1678 PGY 1680
>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
Length = 1905
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 1648 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 1699
Query: 690 NGY 698
GY
Sbjct: 1700 PGY 1702
>AJ297258-1|CAC38827.1| 931|Homo sapiens megacaryocytic acute
leukemia protein, isoform I protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>AJ297257-1|CAC38826.1| 931|Homo sapiens megacaryocytic acute
leukemia protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>AF368061-1|AAK54721.1| 931|Homo sapiens megakaryoblastic
leukemia-1 protein protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 674 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 725
Query: 690 NGY 698
GY
Sbjct: 726 PGY 728
>AB037859-1|BAA92676.2| 1075|Homo sapiens KIAA1438 protein protein.
Length = 1075
Score = 35.5 bits (78), Expect = 0.36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 510 RQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGIDKSYPLQPIHNTERTNRKTLP 689
+ + S G+S+ SPQQP+ P P A +D +PLQP+ T + K P
Sbjct: 818 KNADSPGLSSGSPQQPSSQPGSPAPA--------PSAQMDLEHPLQPLFGTPTSLLKKEP 869
Query: 690 NGY 698
GY
Sbjct: 870 PGY 872
>AF331638-1|AAL56068.2| 903|Homo sapiens PP1221 protein.
Length = 903
Score = 34.7 bits (76), Expect = 0.63
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = +3
Query: 435 KQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRT 614
+QL+E+ +++ +A D Q S + +P P P PG EERR
Sbjct: 540 QQLEEQRVELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAGPSSPGPQEPEKEERRV 599
Query: 615 KAGIDKSYPLQPIHNTERTNRKTLP 689
+ L+P+ R R LP
Sbjct: 600 WTMPPMAVALKPVLQQSREARDELP 624
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = +1
Query: 598 SKRDAQKQALTRATRYSRYTTPKERTG------RHYRTDTRRFRIPPPARGSQSRSDRRR 759
++R ++ ++ +R+TR +T + R G R R RR PPPA S S S R R
Sbjct: 570 ARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRER 629
Query: 760 H 762
H
Sbjct: 630 H 630
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 1.1
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 538 QPHRSSRRLYLISQERFVKCSKRDAQKQALTRATRYS--RYTTPKERTGRHYRTDTRRFR 711
QP RS R S+ R S +++ +R+ YS R +P+ R RT RR
Sbjct: 275 QP-RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR-- 331
Query: 712 IPPPARGSQSRSDRRRHIQQSALIA 786
+PPP R +SRS RR + SA ++
Sbjct: 332 MPPPPRHRRSRSPVRRRRRSSASLS 356
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = +1
Query: 598 SKRDAQKQALTRATRYSRYTTPKERTG------RHYRTDTRRFRIPPPARGSQSRSDRRR 759
++R ++ ++ +R+TR +T + R G R R RR PPPA S S S R R
Sbjct: 601 ARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRER 660
Query: 760 H 762
H
Sbjct: 661 H 661
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = +1
Query: 598 SKRDAQKQALTRATRYSRYTTPKERTG------RHYRTDTRRFRIPPPARGSQSRSDRRR 759
++R ++ ++ +R+TR +T + R G R R RR PPPA S S S R R
Sbjct: 570 ARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRER 629
Query: 760 H 762
H
Sbjct: 630 H 630
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 33.5 bits (73), Expect = 1.4
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 GNLPAMALVQPHRSSRRLYLISQERFVKCSKRDAQKQALTRATRYSRYT----TPKERTG 678
G P+ A P S RRLY S +R CS + +R RYT T KERT
Sbjct: 738 GASPSQAERLPSDSERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTF 797
Query: 679 RHYRTDTRRFRIPPPARGSQSRSDRRR 759
R + R R+ + + ++D+++
Sbjct: 798 DPERVERER-RLIRKEKVEKDKTDKQK 823
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 1.4
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 547 RSSRRLYLISQERFVKCSKRDAQKQALTRATRYS--RYTTPKERTGRHYRTDTRRFRIPP 720
RS R S+ R S +++ +R+ YS R +P+ R RT RR +PP
Sbjct: 277 RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR--MPP 334
Query: 721 PARGSQSRSDRRRHIQQSALIA 786
P R +SRS RR + SA ++
Sbjct: 335 PPRHRRSRSPVRRRRRSSASLS 356
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 1.4
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 547 RSSRRLYLISQERFVKCSKRDAQKQALTRATRYS--RYTTPKERTGRHYRTDTRRFRIPP 720
RS R S+ R S +++ +R+ YS R +P+ R RT RR +PP
Sbjct: 277 RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR--MPP 334
Query: 721 PARGSQSRSDRRRHIQQSALIA 786
P R +SRS RR + SA ++
Sbjct: 335 PPRHRRSRSPVRRRRRSSASLS 356
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 33.5 bits (73), Expect = 1.4
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 GNLPAMALVQPHRSSRRLYLISQERFVKCSKRDAQKQALTRATRYSRYT----TPKERTG 678
G P+ A P S RRLY S +R CS + +R RYT T KERT
Sbjct: 335 GASPSQAERLPSDSERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTF 394
Query: 679 RHYRTDTRRFRIPPPARGSQSRSDRRR 759
R + R R+ + + ++D+++
Sbjct: 395 DPERVERER-RLIRKEKVEKDKTDKQK 420
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 33.5 bits (73), Expect = 1.4
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 GNLPAMALVQPHRSSRRLYLISQERFVKCSKRDAQKQALTRATRYSRYT----TPKERTG 678
G P+ A P S RRLY S +R CS + +R RYT T KERT
Sbjct: 738 GASPSQAERLPSDSERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTF 797
Query: 679 RHYRTDTRRFRIPPPARGSQSRSDRRR 759
R + R R+ + + ++D+++
Sbjct: 798 DPERVERER-RLIRKEKVEKDKTDKQK 823
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 33.5 bits (73), Expect = 1.4
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 GNLPAMALVQPHRSSRRLYLISQERFVKCSKRDAQKQALTRATRYSRYT----TPKERTG 678
G P+ A P S RRLY S +R CS + +R RYT T KERT
Sbjct: 738 GASPSQAERLPSDSERRLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTF 797
Query: 679 RHYRTDTRRFRIPPPARGSQSRSDRRR 759
R + R R+ + + ++D+++
Sbjct: 798 DPERVERER-RLIRKEKVEKDKTDKQK 823
>AC005483-1|AAC83404.2| 484|Homo sapiens unknown protein.
Length = 484
Score = 33.1 bits (72), Expect = 1.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
S+L Q+Q + QQ+Q Q+++ S + Q A QS + PQQP P QP
Sbjct: 6 SQLQQLQLQLQQQQQQQQQQPPPSTNQHPQP-APQAPSQSQQQPLQPTPPQQPPPASQQP 64
>U91935-1|AAB49728.1| 648|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 648
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
S+L Q+Q + QQ+Q Q+++ + A QS + PQQP P QP
Sbjct: 169 SQLQQLQLQLQQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQP 228
>U91934-1|AAB49727.1| 684|Homo sapiens retina-derived POU-domain
factor-1 protein.
Length = 684
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 399 SRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
S+L Q+Q + QQ+Q Q+++ + A QS + PQQP P QP
Sbjct: 169 SQLQQLQLQLQQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQP 228
>AJ401189-1|CAC37685.1| 817|Homo sapiens neurabin II protein
protein.
Length = 817
Score = 32.7 bits (71), Expect = 2.5
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +3
Query: 384 EKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVST-----ASP 548
E GGG+ L + R ++ ++ + +SL E AL ++ S S VS A
Sbjct: 73 EAGGGAGLAEAP-RASERGVRLSLPRASSLNENVDHSALLKLGTSVSERVSRFDSKPAPS 131
Query: 549 QQPTPVPHQPGKV---RQMFEERRTKAGIDK 632
QP P PH P ++ R++FE AG DK
Sbjct: 132 AQPAPPPHPPSRLQETRKLFERSAPAAGGDK 162
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 3.3
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 637 TRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRRHIQQSALIA 786
+R R +P+ R RT RR +PPP R +SRS RR + SA ++
Sbjct: 304 SRSRRRPSPRRRPSPRRRTPPRR--MPPPPRHRRSRSPVRRRRRSSASLS 351
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 3.3
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 637 TRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRRHIQQSALIA 786
+R R +P+ R RT RR +PPP R +SRS RR + SA ++
Sbjct: 304 SRSRRRPSPRRRPSPRRRTPPRR--MPPPPRHRRSRSPVRRRRRSSASLS 351
>AK022964-1|BAB14334.1| 802|Homo sapiens protein ( Homo sapiens
cDNA FLJ12902 fis, clone NT2RP2004347. ).
Length = 802
Score = 31.1 bits (67), Expect = 7.7
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 747 RSQKTHTTVSSHSVKKQQKIDNLVNGSGDLNHNH---EDDISTVKHTLPQSNGE 899
++ + TV H ++K+ K G DL H +DD++T++H++ + GE
Sbjct: 188 QADQARLTVDLHYLEKETKFQK--EGLSDLKHMRYRIKDDLTTIRHSVVEKQGE 239
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 7.7
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 649 RYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRRHIQQSALIA 786
R +P+ R RT RR +PPP R +SRS RR + SA ++
Sbjct: 312 RRPSPRRRPSPRRRTPPRR--MPPPPRHRRSRSPVRRRRRSSASLS 355
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 7.7
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 649 RYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRRHIQQSALIA 786
R +P+ R RT RR +PPP R +SRS RR + SA ++
Sbjct: 312 RRPSPRRRPSPRRRTPPRR--MPPPPRHRRSRSPVRRRRRSSASLS 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,966,137
Number of Sequences: 237096
Number of extensions: 2212571
Number of successful extensions: 6661
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 6100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6634
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15755747910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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