Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_G24
(1130 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 34 0.16
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 34 0.16
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 33 0.28
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 33 0.37
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 32 0.65
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 32 0.65
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 1.1
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 30 2.6
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 30 2.6
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 30 2.6
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 3.5
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 6.1
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 6.1
AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical ... 29 6.1
AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical ... 29 6.1
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 8.0
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.16
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 592 KCSKRDAQKQALTRATRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRR 759
K R ++ R++R SR +P++R R RR R PPP R S+S DRRR
Sbjct: 81 KKKDRSRERDRERRSSR-SRSRSPRDRDRERRR---RRSRSPPPRRRSRSGGDRRR 132
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.16
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 592 KCSKRDAQKQALTRATRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRR 759
K R ++ R++R SR +P++R R RR R PPP R S+S DRRR
Sbjct: 81 KKKDRSRERDRERRSSR-SRSRSPRDRDRERRR---RRSRSPPPRRRSRSGGDRRR 132
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 33.5 bits (73), Expect = 0.28
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 783 SVKKQQKIDNLVNGSGDL-NHNHEDDISTVKHTLPQSNGEXGTDKDEPD 926
S KK++ + +L N SG L + N ED+IS + +SNG+ ++DE +
Sbjct: 138 SFKKEESMHDLKNASGKLPSSNCEDEISIDEFHDSESNGKCSEEEDEDE 186
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 33.1 bits (72), Expect = 0.37
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +1
Query: 553 SRRLYLISQERFVKCSKRDAQKQALTR------ATRYSRYT--TPKERTGRHYRTDTRRF 708
S+R YL S+ R + S + + L+R A R+SR + T + R+GRH R+ +R
Sbjct: 295 SKRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSP 354
Query: 709 RIPPPARGSQSRSDRR 756
P R S+SRS R
Sbjct: 355 PRKRPVRRSRSRSRSR 370
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 32.3 bits (70), Expect = 0.65
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 584
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 585 VRQMFEERRTKAGIDKSYPLQP 650
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 32.3 bits (70), Expect = 0.65
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 584
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 585 VRQMFEERRTKAGIDKSYPLQP 650
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 32.3 bits (70), Expect = 0.65
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 584
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 585 VRQMFEERRTKAGIDKSYPLQP 650
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 32.3 bits (70), Expect = 0.65
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 584
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 585 VRQMFEERRTKAGIDKSYPLQP 650
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 32.3 bits (70), Expect = 0.65
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 584
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 653 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 712
Query: 585 VRQMFEERRTKAGIDKSYPLQP 650
+Q ++ R GI K QP
Sbjct: 713 QQQ--QQSRQPQGIMKPTNAQP 732
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +3
Query: 393 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPH 572
GG++ Q Q QQ+QLQ++ + ++++ QQA+ + P + Q+ PVP+
Sbjct: 740 GGAQPTQQQIWQQQQQLQQQRM---AMFQQQQAQG--QQPGGPQQPMGQWPQQRQLPVPY 794
Query: 573 QPG 581
PG
Sbjct: 795 PPG 797
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 417 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 593
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 594 MFEERRTKAGIDKSYPLQ 647
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 604 RDAQKQALTRATRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRRRHIQQSALI 783
RD Q+++ +R R RY+ + R D RR R +R Q DRRR +
Sbjct: 441 RDRQRRSRSRDRR--RYSPDRRERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSR 498
Query: 784 ALRNSRK*T 810
RN ++ T
Sbjct: 499 DERNEKRRT 507
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 29.1 bits (62), Expect = 6.1
Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Frame = +3
Query: 456 LKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGI-DK 632
+KI + + + ++ S V+T PTP+P + KV + K + D
Sbjct: 436 IKINGIEVKDVEKTKEDKKEVDSKPVATNIQDVPTPIPSETSKVPENLISSAVKVVLNDH 495
Query: 633 SYPLQPIHNTERTNRKTLPNGYAKXXXXXXXXXXXXEKRSQKTHTTVSSHSVKKQQKIDN 812
+ P ++ ++ KR T + S+ K +K++N
Sbjct: 496 DGSIPPHEKSDDPQEFSIEKSSESDTITTSSRASTLRKRRDPNRTLENLQSILKAEKMNN 555
Query: 813 LVNGSGDLNHNHEDD 857
+GS + + +D
Sbjct: 556 GGDGSEEKKQENGND 570
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 29.1 bits (62), Expect = 6.1
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Frame = +3
Query: 450 RELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQMFEERRTKAGID 629
RE +S+ +A + ++RQSP ++ + +P K +Q + +A
Sbjct: 1642 RETHQSSITKAPSLENVAKIRQSPVPESHISTLTRRSPSVENIAKYQQAAQPETHRATTT 1701
Query: 630 KSYP---LQPIHNTERTNRKTLPNGYAKXXXXXXXXXXXXEKRSQKT--HTTVSSHSV-- 788
S P + +HN + R+ K E++ K T V + V
Sbjct: 1702 GSQPVANIAQVHNPSQPERQVFTKETPKIDRIDDILATPHEEKVTKVVKQTEVITSDVDK 1761
Query: 789 ------KKQQKIDNLV----NGSGDLNHNHEDDISTVKHTL 881
+KQQ++ + V +G G + H H+D + K T+
Sbjct: 1762 NYQEQQQKQQQVTSTVTETTSGEGWVQHQHQDFVEPHKSTI 1802
>AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical
protein Y58G8A.4a protein.
Length = 397
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 410 SNAGQIST--ETTTRKRIENSIALRSATGACLGPGEAISQQ 526
S+A IST TTT I N I S G+C+ EAI+ Q
Sbjct: 3 SSAATISTISTTTTPSTISNVITSHSNNGSCIQIAEAIAAQ 43
>AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical
protein Y58G8A.4b protein.
Length = 433
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 410 SNAGQIST--ETTTRKRIENSIALRSATGACLGPGEAISQQ 526
S+A IST TTT I N I S G+C+ EAI+ Q
Sbjct: 3 SSAATISTISTTTTPSTISNVITSHSNNGSCIQIAEAIAAQ 43
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 411 QMQARFQQKQLQERELKIA-SLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 578
Q Q QQ++ Q RE + ++ QQ + + +Q P PQ P P QP
Sbjct: 224 QQQREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQPQPQPQPQPPQRPPQQP 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,021,599
Number of Sequences: 27780
Number of extensions: 370069
Number of successful extensions: 1328
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3057296194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -