Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_G18
(1185 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 33 0.10
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 32 0.14
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 31 0.31
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 30 0.72
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 28 2.2
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 28 2.9
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.9
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 3.9
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 27 3.9
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 5.1
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 27 5.1
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 27 5.1
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 6.7
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 27 6.7
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 6.7
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.9
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 26 8.9
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 26 8.9
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 8.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 8.9
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 32.7 bits (71), Expect = 0.10
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +1
Query: 160 TCNSITQVCMDKILDGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDS 339
T N Q ++ ++ + KEN+KRKR EE K+ ++S + T+ D
Sbjct: 170 TINKSAQKLNNQPIEKSSVDKENAKRKRYVEEGTKQGQKKKPLR---VIELSDEETNEDD 226
Query: 340 IENLNIPAKNTSLIVSENINNVYKNYDEVENKPVYKNGDPIVVE 471
+ + A T + N++ +N D++E + +G P VE
Sbjct: 227 LLGQSPTACTTDANID---NSIPENSDKIEEVSIESSG-PSEVE 266
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 32.3 bits (70), Expect = 0.14
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +1
Query: 205 GDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLN-IPAKNTSLI 381
G+E+ K+N+ + + + +++ RS+ + + S +N + KN S++
Sbjct: 979 GEEVSKDNNVSQERGSQFLRSSHGRSRERSTSARRSRRFSEANSEFDEFGPFSYKNLSVL 1038
Query: 382 VSENINNVYKNYDEVENKPVYKNGDPIVVEIDNKDKPGS 498
N N + K E+ K DP + D P +
Sbjct: 1039 ERANRNAIEKIRSEIAGKLHISPPDPHIGYTPGSDMPSA 1077
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 31.1 bits (67), Expect = 0.31
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Frame = +1
Query: 193 KILDGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLN---IPA 363
K+ + ++ N K S E+ S N+ + ++ + S+SN S E+LN + +
Sbjct: 77 KLTENEDDSFANQAEKPSMEQQNSKNSIKEDANEHSVNSAHSKSSSNASPESLNPSQMMS 136
Query: 364 KNTSLI-VSENINNVYKNYDEV---ENKPVYKNGDPIVVEID--NKDKPGSVNNNHDMI 522
K SL +S+ ++ + N ++ P+ +N E+ KDKP N +HD+I
Sbjct: 137 KRLSLPPMSQFTDSDFVNILRTPFAQSTPLNRNTSSRNTEMPLVRKDKPDFSNGHHDLI 195
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 29.9 bits (64), Expect = 0.72
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 220 KENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIEN 348
K SKRKRS E + NK +E +D SQ N ++++
Sbjct: 108 KTFSKRKRSSENSFNNRNKAKSSETSDSSNTSQSFKENRALKD 150
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 28.3 bits (60), Expect = 2.2
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +1
Query: 202 DGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLI 381
DGD + S+ + E+VS++ +SKT+ +S S S +++L
Sbjct: 246 DGDFSDEPESEERDEVPELVSSSKSKSKTKRKARTALSSVSMS------------SSALF 293
Query: 382 VSENINNVYKNYDEVENKPVYKNGDPIVVEIDNKDKPGSVNNN--HDMIDD 528
+E + + +D+VE + + +++ D KD VN+N +D++D+
Sbjct: 294 RNEGLTLLDDRFDKVEEEYTPIKDERELIDPDQKDVFDLVNDNQFNDIMDE 344
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +1
Query: 226 NSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLIVSENINNV 405
NSKRKRS E SK + Q+ + + + N+ A + +EN+ +
Sbjct: 37 NSKRKRSVTECCEIRLITSKCDFESTQQLVHHNCTGHKVHEHNLNAVDEEDFDTENLPLL 96
Query: 406 YKNYDEVEN 432
+ ++ + E+
Sbjct: 97 FSSFSDNES 105
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 3.9
Identities = 24/92 (26%), Positives = 33/92 (35%)
Frame = +1
Query: 178 QVCMDKILDGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNI 357
+V D D D+ K + R E N D +G +IS S+ NL
Sbjct: 107 EVLNDDSDDEDDNGKYSKLRYEDIEGQEDTNQANDLDADEEGSEISVPSSPKRMSFNLKE 166
Query: 358 PAKNTSLIVSENINNVYKNYDEVENKPVYKNG 453
+ EN N + KNYD + NG
Sbjct: 167 DMEEGDF--DENGNFIRKNYDPESQYDAWLNG 196
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 223 ENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIEN 348
E+S S++ S +EDND S DS S S E+
Sbjct: 156 ESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 197
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 223 ENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIEN 348
E+S S++ S +EDND S DS S S E+
Sbjct: 210 ESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 251
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 244 SCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIEN 348
S E S++ S +EDND S DS S S E+
Sbjct: 109 SDESDSSSSESESSSEDNDSSSSSSDSESESSSED 143
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 683 SLVNAIYSSTASCG*PW**IKSELFKNWPHMLHFSVSGIILLL 555
S+ +Y +S PW + KN MLHFS G+++++
Sbjct: 286 SICLILYICFSSTPIPWPGFSRQALKNLSPMLHFSFHGMLMIV 328
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 5.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 250 EEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLIVSENINNVYKNYDEVE 429
+E N +K++D + Q+S + + I LN N L S+ NN+ +
Sbjct: 66 DERTLENKDGNKSDDANFDQVSGIPSGSLEIPILNSATSNIRLTPSDTYNNI--PVSDTN 123
Query: 430 NKPVYKN--GDPIV 465
N+ + KN G PI+
Sbjct: 124 NEEISKNIYGAPIL 137
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 145 PTSTITCNSITQVCMDKILDGDEIIKENSKRK 240
PT +SI +C+ KILDG+E++ + ++K
Sbjct: 180 PTFRPFVSSIRNICI-KILDGEEVVPSSLQKK 210
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 355 IPAKNTSLIVSENINNVYKNYDEVENK--PVYKNGDPIVVEIDNK---DKPGSVNNNHDM 519
+P+K ++ + +N Y + + VYKNG + +N + P S+N+NH
Sbjct: 497 VPSKMMDELMIPSKHNRYIDLPYIPGSFIKVYKNGSYMGTAFENLLDFNPPNSINSNHYS 556
Query: 520 IDD 528
DD
Sbjct: 557 FDD 559
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 328 SNDSIENLNIPAKNTSLIVSENINNVYKNYDEVENKPVYKNGDPIV 465
S+ SI N+N A + ++NN K EV+N KN IV
Sbjct: 576 SSTSISNINFEAPRYKTNIVHSLNNEQKYVLEVKNGTSEKNPTRIV 621
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 26.6 bits (56), Expect = 6.7
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 208 DEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLIVS 387
D ++K+NS ++ +E+ N+ +S ND SQD S + N + ++NTS S
Sbjct: 30 DTLVKDNSFNEQDDQEV--DNDYKS----NDEPVQSQDPISPNMASNESGNSENTSNYGS 83
Query: 388 ENINNVYK 411
NVY+
Sbjct: 84 SRDENVYQ 91
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 217 IKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLIVSENI 396
+K + + S + SA + ED++ ++ + ++ N+ K L+ ++
Sbjct: 279 VKTETSQNVSQLSVKSAATSLAPVEDDEDDELLLHRHITNKHKDFNLHVKQLGLLHKPSL 338
Query: 397 NNVYKNY--DEVENKPVYKNGDPIVVEIDNKD 486
+ + + Y DE K VYK+G V + +N+D
Sbjct: 339 D-LEEGYIMDENYGKDVYKHGISNVPDDENED 369
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 190 DKILDGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKN 369
+K+ + + E K+KR + S E NDG+ + T ND+ + +N
Sbjct: 6 EKLAAAKQRLLEVKKKKRQAKSKNSVAEDNVDRESNDGNNQVNEPTGNDNTQ----VVEN 61
Query: 370 TSLIVSENI 396
T I + N+
Sbjct: 62 TEDISASNV 70
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 241 RSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSL 378
+ C++ SA+ + KTE + Q D + D +NI ++ S+
Sbjct: 395 QKCDDFSSASFMKEKTEFEEQLQEDNDHSLGDLFSKINISTESPSV 440
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 709 LPQSSKQVCH*SMQYILQQHLVGDLGNKLSQNY 611
+P + K VC +Q ++ HLVGD ++ Q +
Sbjct: 401 VPTTYKLVCAGPLQKVVGLHLVGDFSAEILQGF 433
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +1
Query: 256 IVSANNKRSKTEDNDGHQISQDSTSNDSIENLNIPAKNTSLIVSENINNVYK 411
+V ++ R D D + ++ ++ +E L IP N++ S + +YK
Sbjct: 1 MVKRSSHRQVVLDEDDEENYNNNLDDEKMEVLLIPQSNSTTFASSDATQMYK 52
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 8.9
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 196 ILDGDEIIKENSKRKRSCEEIVSANNKRSKTEDNDGHQISQDSTSNDSIENLN-IPAKNT 372
+L+ ++KENS + + + NN S + N Q+ + + N K+
Sbjct: 1789 VLEKTNLLKENSILQADLQSLSRVNNSSSTAQQNAQSQLLSLTAQLQEVREANQTLRKDQ 1848
Query: 373 SLIVSENINNVYKNYDEVE--NKPVYKNGDPIVVEIDNKDKPGSVNNNHDMIDD 528
++ EN N K ++ E NK + P EI+ + + ++ +N DD
Sbjct: 1849 DTLLRENRNLERKLHEVSEQLNKKFDSSARPF-DEIEMEKEVLTLKSNLAQKDD 1901
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,064,021
Number of Sequences: 5004
Number of extensions: 82533
Number of successful extensions: 263
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 637498240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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