Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G18
         (1185 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   1.1  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    25   4.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   7.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   7.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +1

Query: 304 HQISQDSTSNDSIENLN-IPAKNTSLIVSENINN-VYKNYDEVENKPVYKNGDPIVVEID 477
           H +S ++  N    N N +P     L V++N    V K Y+    +  ++   PIVVE  
Sbjct: 591 HYLSVEARDNGGRGNRNTVPLILNVLDVNDNAPVFVQKRYEVRLKENAFEFESPIVVEAR 650

Query: 478 NKDKPGSVNN 507
           + D  GS N+
Sbjct: 651 DSDLEGSPNS 660


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CYP6S2
            protein.
          Length = 504

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 914  NGSYMGFDGGDRTCIXLSRNWGNI-TXSNLVKLIRPYEYLYE 1036
            N SY+ F  G R CI +   +G + T   L  L++ Y +  E
Sbjct: 428  NPSYLAFGDGPRMCIAM--RFGKLQTCLGLAMLLKSYTFSLE 467


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
            adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
 Frame = +2

Query: 920  SYM-GFDGGDRTCIXLS----RNWGNITXSNLVKLIRPYEYL 1030
            SY+ GFD G R C  LS    R W       L  +I   +YL
Sbjct: 72   SYLDGFDNGQRVCGMLSGIPHRKWQEEVSFRLFSVIGTVKYL 113


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 804 YQTTINWTQMSLLIKYCKASY 742
           +Q T   T++SLL K CKA Y
Sbjct: 88  HQKTTMSTKVSLLKKLCKAEY 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,010,525
Number of Sequences: 2352
Number of extensions: 20154
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134069016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)