Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G16
         (1250 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.86 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   6.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.1  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +1

Query: 589 PXRRPXXPGXPPXXQKXXXXAPPPXRXXGPXPXXXXXXXXPP 714
           P   P  PG PP         PPP     P P        PP
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPP 130


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 23/95 (24%), Positives = 24/95 (25%)
 Frame = +3

Query: 453 GXPPPXKACGXXXGXRXKKXAPXXXPXXPRGGPXKKKPXXGPXNXPXKKAXSPRXPPXXX 632
           G PPP    G       +   P          P        P   P      P  PP   
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQP--PPAPP 586

Query: 633 KXXXXGXPPXPXXGPXXXPPXXXXXPPPPXXGGGG 737
                G PP P  G     P     P P   G GG
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 720 GGGGXXXSXXXGGXXAXXPGGGG 652
           GGGG   S   GG  +   GGGG
Sbjct: 658 GGGGGGGSVGSGGIGSSSLGGGG 680


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
 Frame = +1

Query: 334 KXRXGRXXPPPPPGXXLLXGGPSXXKKXPGGP-PRAXXXXGGXPPPK 471
           K   GR   P  PG     G P   +  PG P P+      G   PK
Sbjct: 382 KGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPK 428


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 715 GGGXXXXXGGXXXGPXSGXGG 653
           GGG     GG   GP  G GG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGG 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.149    0.512 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,786
Number of Sequences: 2352
Number of extensions: 12248
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143061450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)