Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G15
         (1232 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515     31   2.5  
08_02_1482 - 27428208-27428514,27428605-27428906,27431176-274322...    29   7.5  
07_03_1334 + 25864805-25865328,25865592-25865808                       29   7.5  
11_06_0637 + 25715516-25716459,25718196-25718355                       29   9.9  
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232...    29   9.9  
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592...    29   9.9  
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758     29   9.9  

>05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515
          Length = 785

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 180 LLHYWNLLQRPKKKLLNN*RFVSESWMKLMMRNS 281
           +L+YWNLLQ  K+KL    + ++ SW+ + + N+
Sbjct: 608 ILNYWNLLQADKEKLWITNK-IAHSWVTVPLENN 640


>08_02_1482 -
           27428208-27428514,27428605-27428906,27431176-27432228,
           27432305-27432421,27432510-27432843,27433064-27433188,
           27433408-27433475,27433555-27433636,27433753-27433866,
           27433942-27434042,27434145-27434234,27434615-27434819
          Length = 965

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 83  SVXVXTDAVRDFTLKHNEXVLRRAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRE 253
           ++ +  +AVRD  L H+   LR   D  K   +  L E T   +  +   L VC+ +
Sbjct: 144 AIEIYNEAVRDL-LSHDTTPLRLLDDPEKGTTVEKLTEETLRDKDHLRNLLAVCEAQ 199


>07_03_1334 + 25864805-25865328,25865592-25865808
          Length = 246

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 179 IAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLI----VPVV 346
           +AA   + AE E+E  ++    +    +++DEKL  + +ASAR S   A LI      V+
Sbjct: 1   MAAAAAAAAEEEEE--KESGSSRMITLKSNDEKLVEVTEASARQSRAIANLIDDGCADVI 58

Query: 347 KLPNTVGKRTIVVLSSDEE 403
            LPN   K    V+   +E
Sbjct: 59  PLPNVDSKTLAKVIPYCDE 77


>11_06_0637 + 25715516-25716459,25718196-25718355
          Length = 367

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +2

Query: 149 RAFDAHKRRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAA 325
           R + +H++  +  ++ S    +K   ++ E+ K +   ADD   H  VDAS+ PS PAA
Sbjct: 300 RLYSSHQQHKVMMMMRSD---DKLNDQKQELAKSKDTPADDN--HEPVDASSVPSPPAA 353


>10_08_0495 -
           18318028-18320399,18322450-18322981,18323097-18323200,
           18323653-18323701,18323979-18324119,18324889-18324957,
           18325048-18325137,18325301-18326251,18326831-18327502
          Length = 1659

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 158 DAHK--RRCIAALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQL 331
           DA K  R   A LL+S  + E  +   LE   R + E D   L  + DAS+  + PAA L
Sbjct: 294 DAKKVARGVAAPLLDSVNKLESNMKTNLE---RAMKENDRVYLMRVPDASSLGALPAASL 350

Query: 332 IVP 340
           + P
Sbjct: 351 VKP 353


>08_02_1473 -
           27358162-27358275,27358968-27359024,27359102-27359245,
           27359770-27359934,27360020-27360208,27360301-27360535,
           27360826-27360932,27361020-27361103,27361185-27361695,
           27361793-27361854,27363373-27363456
          Length = 583

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = +2

Query: 191 LESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDASARPSAPAAQLIVPVVKLPNTVGK 370
           LE+ AE E  IA+Q +       E ++++   L +        A Q  +P   LP+ VG 
Sbjct: 451 LEAAAEREAAIAKQKQ-------EEEEKRRKQLEEEELESKLAAKQASLPKEPLPDDVGA 503

Query: 371 RTIVVLSSD 397
            T+VV   D
Sbjct: 504 VTVVVRMPD 512


>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
          Length = 223

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 182 AALLESTAETEKEIAEQLEVCKRELDEADDEKLHTLVDAS 301
           +A + S  +     A Q+E  KR LDE    + HT +DAS
Sbjct: 113 SAAVSSVGDLRSSAASQMEALKRRLDEL-HSRAHTDLDAS 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,816,091
Number of Sequences: 37544
Number of extensions: 271736
Number of successful extensions: 877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)