Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G15
         (1232 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z78064-5|CAB01511.1|  473|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    29   5.1  

>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
           protein C07H6.3 protein.
          Length = 1378

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 554 ISELPNASEFCVPAARGQVPKP*SLGCSFLEETF 453
           I+EL +A EF +   R Q+ +  ++ CSFL ETF
Sbjct: 421 INELADALEFSIRDLRSQIVREAAVTCSFLFETF 454


>Z78064-5|CAB01511.1|  473|Caenorhabditis elegans Hypothetical
           protein F57B1.2 protein.
          Length = 473

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +2

Query: 101 DAVRDFTLKHNEXVLRRAFDAHKRRCIAAL--LESTAETEKEIAEQLEVCKRELDEADDE 274
           D   DF   H E +L    +  K    +A+  L+     + EI++ L+  K+E+D+A   
Sbjct: 174 DKQLDFKTDHLEKLLENVLEHSKGWKESAIEELKQIKLWQAEISDALQQMKKEIDDAKST 233

Query: 275 KLHTLVDASARPSAPAAQL 331
           K+       A  +AP A L
Sbjct: 234 KIIHSTPEKAPETAPTASL 252


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 158 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 277
           DA   R +   LES   +   EI +Q+E  K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 158 DAHKRRCIAALLESTAETE-KEIAEQLEVCKRELDEADDEK 277
           DA   R +   LES   +   EI +Q+E  K+EL+ ++ EK
Sbjct: 272 DAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEK 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,644,810
Number of Sequences: 27780
Number of extensions: 234633
Number of successful extensions: 750
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)