Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G14
         (1173 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   4.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   7.5  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 634 VTKQDDDVDWKLLKPEIFGTIM--DFFASGLPVVTDAKPSGDTQINEDDD 777
           V +  DD D   +K +I  +++  D    G P+     P+GD ++ EDDD
Sbjct: 107 VKRSQDDPD--PVKGQIIVSLLSRDSATGGTPLAI-VSPAGDVRVPEDDD 153


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 301  FLKSSKQCNRVLFASTLQRQTXKYHGLSGILKSDIPQ 411
            +++S+ +C++ L  S L       H + GI+  D+ Q
Sbjct: 1972 YVRSTHECSQQLVGSALSVLWMVVHSVHGIMFKDLKQ 2008


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,647
Number of Sequences: 2352
Number of extensions: 17295
Number of successful extensions: 58
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132434028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)