Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G13
         (1256 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09789-1|AAA18501.1|  737|Drosophila melanogaster cytoplasmic ba...    32   1.9  
BT003476-1|AAO39479.1|  711|Drosophila melanogaster RE59350p pro...    32   1.9  
AE014298-904|AAF46170.1|  738|Drosophila melanogaster CG3929-PA ...    32   1.9  
AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize iso...    31   4.4  
AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-P...    31   4.4  

>U09789-1|AAA18501.1|  737|Drosophila melanogaster cytoplasmic basic
           protein protein.
          Length = 737

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 64  NGIILEIMNTSSKSTALSADLNNFVYGVSRRNTQSTPVAHQNWYMFVKNLSGGKGR-CIR 240
           NG+I+   N  +K+  +   +   VYG    N    P+   +W +  KNL G +G+  I+
Sbjct: 578 NGMIIAQQNEMNKNLFIECPVCGIVYGEKVGNQ---PIGSMSWSIISKNLPGHEGQNTIQ 634

Query: 241 VFLDCVS 261
           +  D  S
Sbjct: 635 IVYDIAS 641


>BT003476-1|AAO39479.1|  711|Drosophila melanogaster RE59350p
           protein.
          Length = 711

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 64  NGIILEIMNTSSKSTALSADLNNFVYGVSRRNTQSTPVAHQNWYMFVKNLSGGKGR-CIR 240
           NG+I+   N  +K+  +   +   VYG    N    P+   +W +  KNL G +G+  I+
Sbjct: 552 NGMIIAQQNEMNKNLFIECPVCGIVYGEKVGNQ---PIGSMSWSIISKNLPGHEGQNTIQ 608

Query: 241 VFLDCVS 261
           +  D  S
Sbjct: 609 IVYDIAS 615


>AE014298-904|AAF46170.1|  738|Drosophila melanogaster CG3929-PA
           protein.
          Length = 738

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 64  NGIILEIMNTSSKSTALSADLNNFVYGVSRRNTQSTPVAHQNWYMFVKNLSGGKGR-CIR 240
           NG+I+   N  +K+  +   +   VYG    N    P+   +W +  KNL G +G+  I+
Sbjct: 579 NGMIIAQQNEMNKNLFIECPVCGIVYGEKVGNQ---PIGSMSWSIISKNLPGHEGQNTIQ 635

Query: 241 VFLDCVS 261
           +  D  S
Sbjct: 636 IVYDIAS 642


>AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize
           isoform 2 protein.
          Length = 2645

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +2

Query: 263 EAVNVAISQTDYEADPNANSLLESVSMIGPELCNLGESWAPFIAPWCVNLIIDISTNKSN 442
           E  N     ++ E+D NANS   + +     LCN+ +       P CV   +  S +KS 
Sbjct: 309 ETSNARRGSSNSESDDNANSNSNNATPTTGRLCNVYDKTGTLPVPQCVQAHV-ASVDKSA 367

Query: 443 VPNSTLQSAEP 475
              +    AEP
Sbjct: 368 ATAAISTKAEP 378


>AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-PC,
           isoform C protein.
          Length = 2645

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +2

Query: 263 EAVNVAISQTDYEADPNANSLLESVSMIGPELCNLGESWAPFIAPWCVNLIIDISTNKSN 442
           E  N     ++ E+D NANS   + +     LCN+ +       P CV   +  S +KS 
Sbjct: 309 ETSNARRGSSNSESDDNANSNSNNATPTTGRLCNVYDKTGTLPVPQCVQAHV-ASVDKSA 367

Query: 443 VPNSTLQSAEP 475
              +    AEP
Sbjct: 368 ATAAISTKAEP 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,079,637
Number of Sequences: 53049
Number of extensions: 788124
Number of successful extensions: 2524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6743497755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)