Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_G13
         (1256 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   5.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   9.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   9.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +2

Query: 308 PNANSLLESVSMIGPE-LCNLGESWAPFIAPWCVNLIIDI 424
           P+    ++  +   PE L  L E W P +  W +  I+D+
Sbjct: 478 PSIRGAIQQWTCRQPEPLIELIEHWMPLLPNWILENILDM 517


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 127 LNLQIVQWTCWRCSLSPI 74
           LNL++ +W   R  LSPI
Sbjct: 121 LNLEVERWRPLRSRLSPI 138


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 209 TFPAARDAVLEFFSIVFQEAVNVAISQTDYEADPNANSLLESVSMI 346
           +F AA  ++  ++S   +      I+   Y A   A   LES SMI
Sbjct: 541 SFQAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMI 586


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 209 TFPAARDAVLEFFSIVFQEAVNVAISQTDYEADPNANSLLESVSMI 346
           +F AA  ++  ++S   +      I+   Y A   A   LES SMI
Sbjct: 579 SFQAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMI 624


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,769
Number of Sequences: 438
Number of extensions: 4845
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42982554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)