Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_G10
(1202 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 33 1.6
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 33 1.6
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 3.6
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 3.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 3.6
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 3.6
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 3.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 3.6
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 32 4.8
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 32 4.8
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 32 4.8
AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein. 31 6.3
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 33.5 bits (73), Expect = 1.6
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 681 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 502
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630
Query: 501 RPFYGSWP 478
P Y S P
Sbjct: 631 TPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 33.5 bits (73), Expect = 1.6
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 681 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 502
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 501 RPFYGSWP 478
P Y S P
Sbjct: 632 TPSYLSVP 639
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 597
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 597
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 597
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 598 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 505 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 562
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 563 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 620
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 330 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 387
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 388 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 445
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.3 bits (70), Expect = 3.6
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = -3
Query: 837 PGWTQDDSYRIRRSGRAERGVRAH--SPAW---SERRTPN*DTYSVSYEKAPRFPKGERR 673
PGW++ + + R R+ R R+H SPA S RTP S + P + R
Sbjct: 588 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSRSR 645
Query: 672 TGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 499
T R + S + RG + TP + S AR+ G + +TPA R
Sbjct: 646 TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 703
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 31.9 bits (69), Expect = 4.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 683 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 555
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 31.9 bits (69), Expect = 4.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 683 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 555
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 31.9 bits (69), Expect = 4.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 683 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 555
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF137396-7|AAG41681.1| 326|Homo sapiens HOR5'Beta7 protein.
Length = 326
Score = 31.5 bits (68), Expect = 6.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 627 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 713
+ R PV T+P+ L AF GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,323,454
Number of Sequences: 237096
Number of extensions: 3420808
Number of successful extensions: 13719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13714
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16954238840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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