Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F24
         (1106 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    26   0.59 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   7.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   7.3  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 0.59
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 400 NFPIENNTVLTKGNYAHERNPFPREE 477
           NF  + + +L +  Y+H  NP+P EE
Sbjct: 236 NFSKQASEILNEYFYSHLSNPYPSEE 261


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 619 IKKLNQWYQQKIYEDYPKNITNSQYT 696
           I   NQWY Q I   Y +   N QY+
Sbjct: 191 IDSANQWYSQTIDNSY-QFCDNLQYS 215


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 580 DMVDSVSSNLIKMIKKLNQWYQQKI 654
           D+V  + S L+ M KK+N+ Y  ++
Sbjct: 212 DLVLPIYSQLVFMCKKINKLYGHQL 236


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 619 IKKLNQWYQQKIYEDYPKNITNSQYT 696
           I   NQWY Q I   Y +   N QY+
Sbjct: 182 IDSANQWYSQTIDNSY-QFCDNLQYS 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,475
Number of Sequences: 336
Number of extensions: 4216
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 31960070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)