Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F24
         (1106 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113506-1|AAM29511.1|  491|Drosophila melanogaster RE59088p pro...    31   2.1  
AE014134-1860|AAF52931.2|  491|Drosophila melanogaster CG5096-PA...    31   2.1  
BT003257-1|AAO25014.1|  751|Drosophila melanogaster LD24842p pro...    30   4.9  
AE014134-2855|AAN10990.1|  751|Drosophila melanogaster CG6549-PC...    30   4.9  
AE014134-2854|AAF53619.1|  751|Drosophila melanogaster CG6549-PA...    30   4.9  
AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-P...    30   6.5  

>AY113506-1|AAM29511.1|  491|Drosophila melanogaster RE59088p
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 595 VSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSYNAVTNI-ILPLSKTE 771
           + +NL+   +KL  W   + +ED    +TN    N+ F   NL +N +T++ ILP    E
Sbjct: 54  IDTNLLDCSEKLQDWLSAEDWED----LTNG---NVVFKTINLEHNNLTSVPILPKYDVE 106

Query: 772 N 774
           N
Sbjct: 107 N 107


>AE014134-1860|AAF52931.2|  491|Drosophila melanogaster CG5096-PA
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 595 VSSNLIKMIKKLNQWYQQKIYEDYPKNITNSQYTNIKFYYFNLSYNAVTNI-ILPLSKTE 771
           + +NL+   +KL  W   + +ED    +TN    N+ F   NL +N +T++ ILP    E
Sbjct: 54  IDTNLLDCSEKLQDWLSAEDWED----LTNG---NVVFKTINLEHNNLTSVPILPKYDVE 106

Query: 772 N 774
           N
Sbjct: 107 N 107


>BT003257-1|AAO25014.1|  751|Drosophila melanogaster LD24842p
           protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 682 NSQYTNIKFYYFNLSYNAVTNIILPLSKTENFNESFIERTFEIAKANKIGTHLKQIEE 855
           N+Q  N+ FYY +     ++++ +   KT       I R+ E A    IGT L+QI E
Sbjct: 466 NTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTAREIISRSLEQADL-LIGTILQQIME 522


>AE014134-2855|AAN10990.1|  751|Drosophila melanogaster CG6549-PC,
           isoform C protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 682 NSQYTNIKFYYFNLSYNAVTNIILPLSKTENFNESFIERTFEIAKANKIGTHLKQIEE 855
           N+Q  N+ FYY +     ++++ +   KT       I R+ E A    IGT L+QI E
Sbjct: 466 NTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTAREIISRSLEQADL-LIGTILQQIME 522


>AE014134-2854|AAF53619.1|  751|Drosophila melanogaster CG6549-PA,
           isoform A protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 682 NSQYTNIKFYYFNLSYNAVTNIILPLSKTENFNESFIERTFEIAKANKIGTHLKQIEE 855
           N+Q  N+ FYY +     ++++ +   KT       I R+ E A    IGT L+QI E
Sbjct: 466 NTQLANVLFYYKDSVRRMLSDLHVHFEKTPGTAREIISRSLEQADL-LIGTILQQIME 522


>AE014296-1110|AAN12092.3|  406|Drosophila melanogaster CG32402-PA
           protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 538 YILINFYLSTLYLYF-CQTICILLLGMDFFHVHNCPL*EQYYFQW 407
           Y ++ F+L+T + +F C  + +L+    + H  N P    + FQW
Sbjct: 142 YFVMAFFLATSWSFFLCILLLLLITSPMWVHQQNLPFHAAFPFQW 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,100,138
Number of Sequences: 53049
Number of extensions: 634222
Number of successful extensions: 1447
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5760175428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)