Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F24
         (1106 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81035-4|CAB02737.1|  503|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical...    30   3.4  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    29   5.9  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>Z81035-4|CAB02737.1|  503|Caenorhabditis elegans Hypothetical
           protein C15H11.5 protein.
          Length = 503

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 532 KYINQHCEL-TNNIQLRDMVDSVSSNLIKMIKKLNQWYQQKIYEDYP 669
           KYI +H ++   +  L   +D V+S+ I+  K++   YQ++I+EDYP
Sbjct: 156 KYIKEHNQMHLLHSFLVPQIDRVNSSHIQYDKEMK--YQRQIFEDYP 200


>AL023835-15|CAA19492.2|  520|Caenorhabditis elegans Hypothetical
           protein Y37A1B.9 protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +1

Query: 247 KITMESVNTLKRMAXIDFNKPVAVXVTIINDXALEFVSNWVTDYKI---XNISNNFPIEN 417
           K+   ++ +L   +  DFN      ++IIN+  LE V      Y I    +I N F I N
Sbjct: 94  KVENSNLTSLSFFSSYDFNFCYYTGISIINNSLLEHVDILKKAYYIRANEDIENVFQIMN 153

Query: 418 NTVLTKGNYAHERN 459
           NT L      +  N
Sbjct: 154 NTKLDASKLCNRGN 167


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 394 SNNFPIENNTVLTKGNYAHERNPFPREECISFD 492
           SN +P+ NN ++T GN+ ++   +   + IS D
Sbjct: 204 SNFYPVPNNGIITTGNWTNQHTFYMATKPISID 236


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 394 SNNFPIENNTVLTKGNYAHERNPFPREECISFD 492
           SN +P+ NN ++T GN+ ++   +   + IS D
Sbjct: 168 SNFYPVPNNGIITTGNWTNQHTFYMATKPISID 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,722,422
Number of Sequences: 27780
Number of extensions: 358041
Number of successful extensions: 980
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2992200068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)