Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F22
         (1162 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       35   0.11 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    32   0.99 
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    30   3.0  
09_02_0603 - 11150739-11150746,11150791-11151340                       29   7.0  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           PPP   G PPP    P G     PP P GKKG
Sbjct: 346 PPPPAKGPPPPPP--PKGPSPPPPPPPGGKKG 375



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 22/62 (35%), Positives = 22/62 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP    P  P   G  P PP K   P         GP    P  PG       KK  PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPP----PPPPKGPSPPPPPPPG------GKKGGPPP 379

Query: 384 PP 379
           PP
Sbjct: 380 PP 381



 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/62 (30%), Positives = 19/62 (30%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           P     P  P      P PPPK   P     G    P    P  P        K   PPP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380

Query: 384 PP 379
           PP
Sbjct: 381 PP 382



 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = -2

Query: 927 PXXXLXGXFXXPPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           P     G    PPP G   PPP    P G     PP P  K G
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPP---PPPGGKKGGPPPPPPKGG 385



 Score = 28.7 bits (61), Expect = 9.3
 Identities = 19/60 (31%), Positives = 19/60 (31%)
 Frame = -2

Query: 546 PFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPPPPXXKK 367
           P  P      P PPPK   P     G    P    P  P            PPPPP  KK
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP---KGPSPPPPPPPGGKK 374


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 18/54 (33%), Positives = 18/54 (33%)
 Frame = -2

Query: 960  GXXXXFXPXXXPXXXLXGXFXXPPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
            G      P   P     G    PP  G G PPP    P G     PP P G  G
Sbjct: 1079 GGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPP-PPPPGGITGVPPPPPIGGLG 1131



 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = -2

Query: 939  PXXXPXXXLXGXFXXPPPXG--GGXPPPXXKXPXGXXXXXPPXPXGKKG 799
            P   P   L G    PPP G  GG PPP      G     PP P G  G
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPP---NAHGGVAPPPPPPRGHGG 1194



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = -2

Query: 963  GGXXXXFXPXXXPXXXLXGXFXXPPPXGGGXPPPXXKXPXGXXXXXPP 820
            GG      P   P     G    PPP GG   PP    P G     PP
Sbjct: 1128 GGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPP 1175


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PPP     PPP    P G     PP P G
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVG 301


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
 Frame = -2

Query: 939 PXXXPXXXLXGXFXXPPPXGGGXPPPXXK--XPXGXXXXXPPXPXG 808
           P   P     G F  PPP G   PPP      P       PP P G
Sbjct: 23  PASRPPRLEKGNFALPPPFGFPPPPPPGSTFVPLPQSGVPPPPPLG 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.149    0.483 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,672,596
Number of Sequences: 37544
Number of extensions: 417697
Number of successful extensions: 3711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)