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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F22
         (1162 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    38   0.014
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    35   0.13 
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    35   0.13 
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    35   0.13 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    34   0.17 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    34   0.17 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    34   0.17 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    32   0.89 
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    32   0.89 
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    30   3.6  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      30   3.6  
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    24   6.9  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   8.3  

>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = -2

Query: 966 PGGXXXXFXPXXXPXXXLXGXFXXPPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           P G    F     P   + G    PPP G G PPP    P G     PP P  ++G
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQG 750


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 20/60 (33%), Positives = 20/60 (33%)
 Frame = -2

Query: 558 FXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPPPP 379
           F G    P  G   P PPPK   P    G     P    P  P  G         PPPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284



 Score = 31.9 bits (69), Expect = 0.89
 Identities = 21/67 (31%), Positives = 24/67 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP  G P  P  G   P PPP+   P    G          P   G G         PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG--------SPPP 331

Query: 384 PPXXKKK 364
           PP  K++
Sbjct: 332 PPRQKRQ 338



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPP-KXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPP 388
           PP  G P  P  G   P PPP     P    G     P    P  P  G     +   PP
Sbjct: 241 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298

Query: 387 PPP 379
           PPP
Sbjct: 299 PPP 301



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           PPP G   PPP    P       PP P   +G
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 20/60 (33%), Positives = 20/60 (33%)
 Frame = -2

Query: 558 FXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPPPP 379
           F G    P  G   P PPPK   P    G     P    P  P  G         PPPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305



 Score = 31.9 bits (69), Expect = 0.89
 Identities = 21/67 (31%), Positives = 24/67 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP  G P  P  G   P PPP+   P    G          P   G G         PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG--------SPPP 352

Query: 384 PPXXKKK 364
           PP  K++
Sbjct: 353 PPRQKRQ 359



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPP-KXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPP 388
           PP  G P  P  G   P PPP     P    G     P    P  P  G     +   PP
Sbjct: 262 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319

Query: 387 PPP 379
           PPP
Sbjct: 320 PPP 322



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           PPP G   PPP    P       PP P   +G
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 20/60 (33%), Positives = 20/60 (33%)
 Frame = -2

Query: 558 FXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPPPP 379
           F G    P  G   P PPPK   P    G     P    P  P  G         PPPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290



 Score = 31.9 bits (69), Expect = 0.89
 Identities = 21/67 (31%), Positives = 24/67 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP  G P  P  G   P PPP+   P    G          P   G G         PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPP---TGSLPPPQAGGSPPPAGTG--------SPPP 337

Query: 384 PPXXKKK 364
           PP  K++
Sbjct: 338 PPRQKRQ 344



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPP-KXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPP 388
           PP  G P  P  G   P PPP     P    G     P    P  P  G     +   PP
Sbjct: 247 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304

Query: 387 PPP 379
           PPP
Sbjct: 305 PPP 307



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXPXGKKG 799
           PPP G   PPP    P       PP P   +G
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoformb protein.
          Length = 1437

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
 Frame = -2

Query: 1062 PPXKXFXPPPXTPXFXXFFXXXXXPXXKXFFFP--GGXXXXFXPXXXPXXXLXGXFXXPP 889
            PP     PPP  P           P       P  GG      P   P   + G    PP
Sbjct: 707  PPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPP 762

Query: 888  PXGGGXPPPXXKXPXGXXXXXPPXP 814
            P  GG PPP    P G     PP P
Sbjct: 763  PPPGGCPPPPPPPPPGGFKGGPPPP 787



 Score = 33.1 bits (72), Expect = 0.38
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXP 814
           PPP GG  PPP    P G     PP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGP-----XXXXPXXPGXGVFFXXKK 400
           PP  G P  P  GG  P PPP    P    GG    P         P  P  G F    K
Sbjct: 730 PPPGGLP--PITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGF----K 781

Query: 399 XXPPPPP 379
             PPPPP
Sbjct: 782 GGPPPPP 788



 Score = 29.9 bits (64), Expect = 3.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 172 PXGGXPPXXGGXGXPPXPP 228
           P GG PP  GG   PP PP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P G     PP P G
Sbjct: 752 PPISGG-PPPPPPPPGGCPPPPPPPPPG 778



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P       PP P G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG 734


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoforma protein.
          Length = 1435

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
 Frame = -2

Query: 1062 PPXKXFXPPPXTPXFXXFFXXXXXPXXKXFFFP--GGXXXXFXPXXXPXXXLXGXFXXPP 889
            PP     PPP  P           P       P  GG      P   P   + G    PP
Sbjct: 707  PPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPP 762

Query: 888  PXGGGXPPPXXKXPXGXXXXXPPXP 814
            P  GG PPP    P G     PP P
Sbjct: 763  PPPGGCPPPPPPPPPGGFKGGPPPP 787



 Score = 33.1 bits (72), Expect = 0.38
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXP 814
           PPP GG  PPP    P G     PP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGP-----XXXXPXXPGXGVFFXXKK 400
           PP  G P  P  GG  P PPP    P    GG    P         P  P  G F    K
Sbjct: 730 PPPGGLP--PITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGF----K 781

Query: 399 XXPPPPP 379
             PPPPP
Sbjct: 782 GGPPPPP 788



 Score = 29.9 bits (64), Expect = 3.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 172 PXGGXPPXXGGXGXPPXPP 228
           P GG PP  GG   PP PP
Sbjct: 747 PPGGLPPISGGPPPPPPPP 765



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P G     PP P G
Sbjct: 752 PPISGG-PPPPPPPPGGCPPPPPPPPPG 778



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P       PP P G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG 734


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
 Frame = -2

Query: 1062 PPXKXFXPPPXTPXFXXFFXXXXXPXXKXFFFP--GGXXXXFXPXXXPXXXLXGXFXXPP 889
            PP     PPP  P           P       P  GG      P   P   + G    PP
Sbjct: 290  PPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPP 345

Query: 888  PXGGGXPPPXXKXPXGXXXXXPPXP 814
            P  GG PPP    P G     PP P
Sbjct: 346  PPPGGCPPPPPPPPPGGFKGGPPPP 370



 Score = 33.1 bits (72), Expect = 0.38
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -2

Query: 894 PPPXGGGXPPPXXKXPXGXXXXXPPXP 814
           PPP GG  PPP    P G     PP P
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGP-----XXXXPXXPGXGVFFXXKK 400
           PP  G P  P  GG  P PPP    P    GG    P         P  P  G F    K
Sbjct: 313 PPPGGLP--PITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGF----K 364

Query: 399 XXPPPPP 379
             PPPPP
Sbjct: 365 GGPPPPP 371



 Score = 29.9 bits (64), Expect = 3.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 172 PXGGXPPXXGGXGXPPXPP 228
           P GG PP  GG   PP PP
Sbjct: 330 PPGGLPPISGGPPPPPPPP 348



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P G     PP P G
Sbjct: 335 PPISGG-PPPPPPPPGGCPPPPPPPPPG 361



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 891 PPXGGGXPPPXXKXPXGXXXXXPPXPXG 808
           PP  GG PPP    P       PP P G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG 317


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 0.89
 Identities = 22/62 (35%), Positives = 24/62 (38%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP    P  P  GG  P PPP  R P    GG    P    P   G G++       PP 
Sbjct: 321 PPSRFGP--PGMGGMPPPPPPGMRYP----GGMPPPPPPRYP-SAGPGMYPPPPPSRPPA 373

Query: 384 PP 379
           PP
Sbjct: 374 PP 375


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 31.9 bits (69), Expect = 0.89
 Identities = 22/62 (35%), Positives = 24/62 (38%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
           PP    P  P  GG  P PPP  R P    GG    P    P   G G++       PP 
Sbjct: 331 PPSRFGP--PGMGGMPPPPPPGMRYP----GGMPPPPPPRYP-SAGPGMYPPPPPSRPPA 383

Query: 384 PP 379
           PP
Sbjct: 384 PP 385


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
 Frame = -2

Query: 576 FXXXPPFXGXPFXPXX-GGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXP-GXGVFFXXK 403
           F   P   G P  P   GG  P PP     PG +    G GP    P  P G G +    
Sbjct: 390 FAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQG-GPGGFGPPPPGGPGAYGPPP 448

Query: 402 KXXPP---PPP 379
              PP   PPP
Sbjct: 449 TGFPPVGAPPP 459


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 928 PXXXFXGGXFXPPPFXGGXPPP 863
           P   F GG   PPP  GG PPP
Sbjct: 86  PPPMFAGGIPPPPPMMGGIPPP 107


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXG 421
           PP       P  GG    PPP  R P    GG G       P  PG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 17/48 (35%), Positives = 17/48 (35%)
 Frame = -2

Query: 564 PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXG 421
           PP       P  GG    PPP  R P    GG G       P  PG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 24.2 bits (50), Expect(2) = 6.9
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 167 KXPGGGXPXXXGXXGPPPPPP 229
           K P           GPPPPPP
Sbjct: 519 KPPSSSGSGSNRRSGPPPPPP 539



 Score = 23.0 bits (47), Expect(2) = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 212 PPPPPPXXXXGXXXXKXG 265
           PPPPPP    G    + G
Sbjct: 535 PPPPPPPRSSGANGNRNG 552


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 20/68 (29%), Positives = 23/68 (33%)
 Frame = -2

Query: 564  PPFXGXPFXPXXGGXXPXPPPKXRXPGFFXGGXGXGPXXXXPXXPGXGVFFXXKKXXPPP 385
            PP    P  P      P PPP    P       G  P    P  P   +F       PPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGV-PLPVPPPPP---LFSPSMILPPPP 1393

Query: 384  PPXXKKKK 361
            PP   ++K
Sbjct: 1394 PPLPSEEK 1401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.149    0.483 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,458,906
Number of Sequences: 27780
Number of extensions: 277099
Number of successful extensions: 2148
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)

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