Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F19
         (1160 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0072 - 13051145-13052362                                         32   0.75 
01_05_0743 + 24835349-24836009,24836925-24837068,24837154-248373...    32   0.75 
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213...    32   0.99 
02_04_0605 - 24290777-24290830,24290914-24291075,24291494-242916...    30   4.0  
04_04_0734 + 27648661-27649596                                         29   5.3  
05_02_0148 - 7085892-7086011,7086681-7087004,7088258-7088419,708...    29   7.0  

>07_03_0072 - 13051145-13052362
          Length = 405

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 140 VRRSGHPQRQKCLPHCGAPVPSLHXPGGRSPHVVPVVSA-ARLHGHVLGL 286
           +R +   +R  CLP      P    P GR P V+P++SA  RL G VLG+
Sbjct: 68  LRGANSRRRMSCLPQ-----PKAAIPRGRLPGVMPLISAETRLGGVVLGM 112


>01_05_0743 +
           24835349-24836009,24836925-24837068,24837154-24837306,
           24837627-24837742,24837826-24837993,24838610-24838737,
           24838827-24838926,24839119-24839205
          Length = 518

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +2

Query: 395 VLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDV 571
           VL   + D+R  YT GR +   QFG+    T     G     +S+  R +A R+  EDV
Sbjct: 54  VLGRPMEDVRATYTFGRELGRGQFGVTYLVT-HKATGKRFACKSIATRKLAHRDDIEDV 111


>05_07_0280 -
           28920864-28920971,28921076-28921175,28921267-28921394,
           28922013-28922180,28922280-28922395,28922584-28922736,
           28922904-28923047,28923401-28924133
          Length = 549

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 395 VLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDV 571
           VL   + D+R  YT GR +   QFG+   AT    G      +S+  R +AR +  +DV
Sbjct: 78  VLGRPMEDVRATYTFGRELGRGQFGVTYLATHKPTGRRY-ACKSIAARKLARPDDLDDV 135


>02_04_0605 -
           24290777-24290830,24290914-24291075,24291494-24291694,
           24291777-24291961,24292117-24292246
          Length = 243

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 780 PSYKPLRDFLKYDFFQTLSVIG 845
           PSY PL + +K+ FF  LS++G
Sbjct: 70  PSYLPLPELVKFVFFANLSIVG 91


>04_04_0734 + 27648661-27649596
          Length = 311

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 522 CALQLGPPPTPAVALRSMPNCGEG 451
           CA    PPP+PA  L+ +P C  G
Sbjct: 205 CAPPPNPPPSPATPLQPLPECDGG 228


>05_02_0148 -
           7085892-7086011,7086681-7087004,7088258-7088419,
           7088866-7089066,7089148-7089332,7089459-7089588
          Length = 373

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 780 PSYKPLRDFLKYDFFQTLSVIG 845
           PSY P+ + +K+ FF  LS++G
Sbjct: 70  PSYLPVPELIKFVFFANLSIVG 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,573,185
Number of Sequences: 37544
Number of extensions: 605450
Number of successful extensions: 2012
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2011
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)