Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F19
(1160 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein. 267 6e-71
BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein. 267 6e-71
AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein. 267 6e-71
Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membra... 252 2e-66
AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein. 154 5e-37
AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein. 122 3e-27
AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy ch... 35 0.49
AK130906-1|BAC85455.1| 195|Homo sapiens protein ( Homo sapiens ... 33 1.5
AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable... 33 2.0
AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy ch... 33 2.6
AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy ch... 32 3.4
U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein. 32 4.5
AM083007-1|CAL07153.1| 100|Homo sapiens immunoglobulin heavy ch... 32 4.5
AK127385-1|BAC86952.1| 176|Homo sapiens protein ( Homo sapiens ... 32 4.5
AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable... 32 4.5
U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid... 31 6.0
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein. 31 6.0
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 31 6.0
AM083097-1|CAL07243.1| 102|Homo sapiens immunoglobulin heavy ch... 31 6.0
AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.0
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 31 6.0
AF471353-1|AAQ05528.1| 124|Homo sapiens Ig heavy chain variable... 31 6.0
U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chai... 31 7.9
AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha he... 31 7.9
AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha he... 31 7.9
AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.9
AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.9
AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.9
AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.9
AM080025-1|CAL04171.1| 101|Homo sapiens immunoglobulin heavy ch... 31 7.9
AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy ch... 31 7.9
>BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 267 bits (654), Expect = 6e-71
Identities = 128/257 (49%), Positives = 160/257 (62%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 13 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 72
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 73 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLA 132
Query: 501 XXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILM 680
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+Q+++G+ LM
Sbjct: 133 ESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALM 192
Query: 681 ILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMI 860
ILV +G++TK Y NA+W +P YKP+ DFLKYDFFQT+SVIGGLL++
Sbjct: 193 ILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLV 252
Query: 861 VYLGPGGVSMDEHKKKW 911
V LGPGGVSMDE KK+W
Sbjct: 253 VALGPGGVSMDEKKKEW 269
>BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 267 bits (654), Expect = 6e-71
Identities = 128/257 (49%), Positives = 160/257 (62%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 13 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 72
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 73 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLA 132
Query: 501 XXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILM 680
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+Q+++G+ LM
Sbjct: 133 ESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALM 192
Query: 681 ILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMI 860
ILV +G++TK Y NA+W +P YKP+ DFLKYDFFQT+SVIGGLL++
Sbjct: 193 ILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLV 252
Query: 861 VYLGPGGVSMDEHKKKW 911
V LGPGGVSMDE KK+W
Sbjct: 253 VALGPGGVSMDEKKKEW 269
>AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 267 bits (654), Expect = 6e-71
Identities = 128/257 (49%), Positives = 160/257 (62%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 13 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 72
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 73 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLA 132
Query: 501 XXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILM 680
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+Q+++G+ LM
Sbjct: 133 ESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALM 192
Query: 681 ILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMI 860
ILV +G++TK Y NA+W +P YKP+ DFLKYDFFQT+SVIGGLL++
Sbjct: 193 ILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLV 252
Query: 861 VYLGPGGVSMDEHKKKW 911
V LGPGGVSMDE KK+W
Sbjct: 253 VALGPGGVSMDEKKKEW 269
>Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membrane
protein protein.
Length = 254
Score = 252 bits (617), Expect = 2e-66
Identities = 122/249 (48%), Positives = 153/249 (61%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 6 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 65
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 66 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLVLA 125
Query: 501 XXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILM 680
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF I+Q+++G+ LM
Sbjct: 126 ESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALM 185
Query: 681 ILVTVGYRTKXXXXXXXXXXXXXXXYHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMI 860
ILV +G++TK Y NA+W +P YKP+ DFLKYDFFQT+SVIGGLL++
Sbjct: 186 ILVAIGFKTKLAALTLVVWLFAINVYFNAFWTIPVYKPMHDFLKYDFFQTMSVIGGLLLV 245
Query: 861 VYLGPGGVS 887
V LGPGGVS
Sbjct: 246 VALGPGGVS 254
>AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein.
Length = 186
Score = 154 bits (374), Expect = 5e-37
Identities = 78/167 (46%), Positives = 95/167 (56%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 13 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 72
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 73 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLA 132
Query: 501 XXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISF 641
S+FAGVP++ E+ PK Y+QL GR+LL MF+TLL F+ SF
Sbjct: 133 ESRSEGKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASF 179
>AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein.
Length = 188
Score = 122 bits (293), Expect = 3e-27
Identities = 63/142 (44%), Positives = 76/142 (53%)
Frame = +3
Query: 141 FAAQVIRKGKNVFPTVARXXXXXXXXXXXXRMWFQWSAQRAXMDMSWGCGKFLATMFVXV 320
FA Q +R K P VAR RMWFQWS QR +D +W CG LA+ FV +
Sbjct: 13 FADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASSFVFL 72
Query: 321 NLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXXXXXXXXXXXXXX 500
NL GQL GCV+VL R V AC LF I+ LQT AYSILWD++F
Sbjct: 73 NLLGQLTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLA 132
Query: 501 XXXXXXXSLFAGVPSLGENKPK 566
S+FAGVP++ E+ PK
Sbjct: 133 ESRSEGKSMFAGVPTMRESSPK 154
>AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 35.1 bits (77), Expect = 0.49
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T T R P G++ + G GGGP+ A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGFTFSSYAMTWVRQAPGK--GLEWVSIIGAGGGPTYYADSVK 68
Query: 533 GRAVARREQTEDVL 574
GR R+ ++D L
Sbjct: 69 GRFTISRDNSKDTL 82
>AK130906-1|BAC85455.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ27396 fis, clone WMC01862. ).
Length = 195
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 303 WRGICRSPRTCPXRRAALTTGTTCGDRPPGMWREGTGAPQWG 178
+RG + R CP A+ T PG W EG+G WG
Sbjct: 43 YRGKQQGHRGCPGCMVAMDTWPAVLPELPGFWGEGSGGQAWG 84
>AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 126
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 431 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 574
Y M +P G++ A GGG S A SV+GR R+ +E++L
Sbjct: 32 YAMNWVRQAPGKGLEWVAVISAGGGNSYYADSVKGRFTISRDNSENIL 79
>AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 32.7 bits (71), Expect = 2.6
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T + Y M +P G++ +T G GGG + A SV+
Sbjct: 12 GGGLVQPGGSLRLSCAASGFTFSK--YAMDWVRQAPGKGLEWVSTFGAGGGSTYYADSVK 69
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 70 GRFTISRDNSKNTL 83
>AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 32.3 bits (70), Expect = 3.4
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 431 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVLATRRS 589
Y M +P G++ +++ G GG S A SV+GRA R+ +++ L + S
Sbjct: 35 YVMSWVRQAPGRGLEWASSIGGSGGNSHYADSVKGRATISRDNSKNTLYLQMS 87
>U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein.
Length = 123
Score = 31.9 bits (69), Expect = 4.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T I Y MG +P G++ + GG S A SV+
Sbjct: 8 GGGLVQPGGSLRLSCAASGFTFIN--YAMGWVRQAPGEGLEWVSGISGSGGTSHSADSVK 65
Query: 533 GRAVARREQTEDVLA 577
GR RE +++ L+
Sbjct: 66 GRFTISRENSKNTLS 80
>AM083007-1|CAL07153.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.9 bits (69), Expect = 4.5
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2
Query: 335 IRXMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS* 514
+ + G Q G LR + S +T Y M +P G++ + G GGP+
Sbjct: 5 VHLLVSGGGLVQPGGSLRFSCAASRLTFNN--YVMSWVRQAPGKGLEWVSPFGGSGGPTY 62
Query: 515 RAQSVRGRAVARREQTEDVLATR 583
A SV+GR R+++++ L T+
Sbjct: 63 HADSVKGRFSISRDKSKNTLYTQ 85
>AK127385-1|BAC86952.1| 176|Homo sapiens protein ( Homo sapiens
cDNA FLJ45467 fis, clone BRSTN2015699. ).
Length = 176
Score = 31.9 bits (69), Expect = 4.5
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 110 HAFRSQPLXSVRRSGHPQRQKCLPHCGAPVPSLHXP-GGRSPHVVPVVSAARLHGHVLGL 286
H+ R L + ++C HC P + H P G ++ P + + G +
Sbjct: 34 HSLRVLELEEQEHMSRTKAERCPSHCKQPGTASHIPTGAKAKACEPGAATLQESGSPVHR 93
Query: 287 RQIPRHNVCXSKFIWSIRXMCYGARK 364
PR + S+ +W R C+G R+
Sbjct: 94 DSAPRGDATSSR-VWGQRD-CWGGRR 117
>AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 116
Score = 31.9 bits (69), Expect = 4.5
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + + S T T R P G++ A+ G GGP+ A SV+
Sbjct: 8 GGDLVQPGGSLRLSCVASGFTFRTYVVTWVRQAPGK--GLEWVASIGATGGPTYYADSVK 65
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 66 GRFTISRDNSKNTL 79
>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
rich nuclear protein isoform protein.
Length = 1021
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 179 PHCGAPVPSLHXPGGRSPHVVPVVSAARLHGHVLGLRQI 295
P G+ V +H P +PH+ ++ RLHG V G + +
Sbjct: 16 PRTGSAVAPVHPPNRSAPHLPGLMCLLRLHGSVGGAQNL 54
>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
Length = 1284
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 179 PHCGAPVPSLHXPGGRSPHVVPVVSAARLHGHVLGLRQI 295
P G+ V +H P +PH+ ++ RLHG V G + +
Sbjct: 47 PRTGSAVAPVHPPNRSAPHLPGLMCLLRLHGSVGGAQNL 85
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 179 PHCGAPVPSLHXPGGRSPHVVPVVSAARLHGHVLGLRQI 295
P G+ V +H P +PH+ ++ RLHG V G + +
Sbjct: 47 PRTGSAVAPVHPPNRSAPHLPGLMCLLRLHGSVGGAQNL 85
>AM083097-1|CAL07243.1| 102|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 102
Score = 31.5 bits (68), Expect = 6.0
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 332 SIRXMCYGARKA--QSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGG 505
S+R C+ R+A G LR + S T R Y M +P G++ + GG
Sbjct: 3 SVRCSCWSLREAWYSRGGSLRLSCAASGFTFRR--YAMSWVRQAPGKGLEWVSGISGSGG 60
Query: 506 PS*RAQSVRGRAVARREQTEDVL 574
+ A SV+GR R+ +E+ L
Sbjct: 61 TTNYADSVKGRLTISRDSSENTL 83
>AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.5 bits (68), Expect = 6.0
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +2
Query: 335 IRXMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS* 514
+R + G Q G LR + S T R Y M +P G++ +T GG +
Sbjct: 5 VRLLESGGGMVQPGGSLRLSCAASGFTFSR--YAMSWVRQAPGKGLEWVSTVSTGGDKTY 62
Query: 515 RAQSVRGRAVARREQTEDVL 574
A SV+GR R+ + D L
Sbjct: 63 YAGSVKGRFTISRDNSMDTL 82
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 179 PHCGAPVPSLHXPGGRSPHVVPVVSAARLHGHVLGLRQI 295
P G+ V +H P +PH+ ++ RLHG V G + +
Sbjct: 47 PRTGSAVAPVHPPNRSAPHLPGLMCLLRLHGSVGGAQNL 85
>AF471353-1|AAQ05528.1| 124|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 124
Score = 31.5 bits (68), Expect = 6.0
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T + R P G+D +T G GGG + A SV+
Sbjct: 8 GGGLVQPGGSLRLSCAASGFTFSNCAMSWVRQAPGQ--GLDWVSTIGHGGGDTYYADSVK 65
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 66 GRFTISRDNSKNTL 79
>U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 116
Score = 31.1 bits (67), Expect = 7.9
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + + S IT +TM SP G++ +T VGG S A +V+
Sbjct: 8 GGGLIQPGGSLRLSCVASGITFS--SHTMNWVRQSPGKGLEWISTIYVGGTSSYYADAVK 65
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 66 GRFTVSRDNSKNTL 79
>AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 108
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 431 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 574
Y M +P G++ ++ GVGGG + A SV+GR R+ ++ L
Sbjct: 4 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 51
>AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 107
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 431 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 574
Y M +P G++ ++ GVGGG + A SV+GR R+ ++ L
Sbjct: 3 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 50
>AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 7.9
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T Y M +P G++ +T GGG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASAFTFSN--YAMNWVRQAPGKGLEWVSTVSSGGGSTYYADSVK 68
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 7.9
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G QSG LR + S T T R P G++ ++ GGG + A SV+
Sbjct: 11 GGGLVQSGGSLRLSCAASRFTFTTTAMTWVRQAPGK--GLEWVSSINAGGGATYYADSVK 68
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 7.9
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S +T R Y M +P G++ +T GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLTFSR--YAMSWVRQAPGKGLEWVSTISAAGGDTCYADSVK 68
Query: 533 GRAVARREQTEDVL 574
GR R+ +++ L
Sbjct: 69 GRFTISRDNSQNTL 82
>AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 7.9
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S +T R Y M +P G++ + G GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLT-FR-NYAMSWVRQAPGKGLEWVSVIGASGGSAYYADSVK 68
Query: 533 GRAVARREQTEDVL 574
GR R+ + D L
Sbjct: 69 GRFTISRDNSRDTL 82
>AM080025-1|CAL04171.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 431 YTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVRGRAVARREQTEDVL 574
YTMG +P G+D ++ GG + A SV+GR R+ +++ L
Sbjct: 35 YTMGWVRQAPGKGLDWVSSTSGNGGTTYYADSVKGRFTISRDTSKNTL 82
>AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.1 bits (67), Expect = 7.9
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 353 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIDRSATAGVGGGPS*RAQSVR 532
G Q G LR + S T Y M +P G++ +T GGP+ A SVR
Sbjct: 11 GGNLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAPGKGLEWVSTISDSGGPTYYADSVR 68
Query: 533 GRAVARREQTEDVL 574
GR R+ + + L
Sbjct: 69 GRFTISRDTSRNTL 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,689,993
Number of Sequences: 237096
Number of extensions: 3193551
Number of successful extensions: 22612
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22599
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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