Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F15
         (1178 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   5.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   5.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   5.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   5.9  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   5.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   5.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 171 NSXTNFTNKAFFSLHXXLWFVQTHQW 94
           N+   FT K FF+L      + +H+W
Sbjct: 381 NTKLQFTAKDFFNLDWTFCHMVSHKW 406


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 844 YRHWQQPLVNR 876
           YRHWQ PL  R
Sbjct: 344 YRHWQIPLGRR 354


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 864 WLLPVAISRVLPGWTQD 814
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 864 WLLPVAISRVLPGWTQD 814
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 864 WLLPVAISRVLPGWTQD 814
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 864 WLLPVAISRVLPGWTQD 814
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 159 NFTNKAFFSLH 127
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 159 NFTNKAFFSLH 127
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 684 EAWRFLIAHAVGISVRCRSFA-PSWAVCTNPPFQPDRCALS 803
           +A  F I+   GI+ +   ++ P+W+    P F+P +  +S
Sbjct: 25  QALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVS 65


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 684 EAWRFLIAHAVGISVRCRSFA-PSWAVCTNPPFQPDRCALS 803
           +A  F I+   GI+ +   ++ P+W+    P F+P +  +S
Sbjct: 45  QALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVS 85


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 136 KKCFICEICXAIALFVTIISCNKQVN 213
           K C +C+    I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,298
Number of Sequences: 336
Number of extensions: 5112
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34434398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)