SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F13
         (1225 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59357-1|CAA42007.1|  128|Homo sapiens Epstein-Barr virus small ...    84   1e-15
D17652-1|BAA04545.1|  128|Homo sapiens HBp15/L22 protein.              84   1e-15
CR456873-1|CAG33154.1|  128|Homo sapiens RPL22 protein.                84   1e-15
BC066314-1|AAH66314.1|  128|Homo sapiens ribosomal protein L22 p...    84   1e-15
BC058887-1|AAH58887.1|  128|Homo sapiens ribosomal protein L22 p...    84   1e-15
BC035566-1|AAH35566.1|  128|Homo sapiens ribosomal protein L22 p...    84   1e-15
AL031847-9|CAI19448.1|  128|Homo sapiens ribosomal protein L22 p...    84   1e-15
AF136171-1|AAP97261.1|  128|Homo sapiens heparin-binding protein...    84   1e-15
BC107708-1|AAI07709.1|  122|Homo sapiens RPL22L1 protein protein.      75   5e-13
BC062731-1|AAH62731.1|  132|Homo sapiens RPL22L1 protein protein.      75   5e-13

>X59357-1|CAA42007.1|  128|Homo sapiens Epstein-Barr virus small RNA
            associated protein protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>D17652-1|BAA04545.1|  128|Homo sapiens HBp15/L22 protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>CR456873-1|CAG33154.1|  128|Homo sapiens RPL22 protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>BC066314-1|AAH66314.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>BC058887-1|AAH58887.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>BC035566-1|AAH35566.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>AL031847-9|CAI19448.1|  128|Homo sapiens ribosomal protein L22
           protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>AF136171-1|AAP97261.1|  128|Homo sapiens heparin-binding protein
           HBp15 protein.
          Length = 128

 Score = 83.8 bits (198), Expect = 1e-15
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVV-VARDKPKVAITAXIPFSX 388
           FT+ CTHP     +   NFEQ L+  +KV GK  NL   VV + R K K+ +T+ +PFS 
Sbjct: 21  FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK 80

Query: 389 XXXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                           RDWLRVVA++ ++YELRYF
Sbjct: 81  RYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115


>BC107708-1|AAI07709.1|  122|Homo sapiens RPL22L1 protein protein.
          Length = 122

 Score = 74.9 bits (176), Expect = 5e-13
 Identities = 40/94 (42%), Positives = 47/94 (50%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVVVARDKPKVAITAXIPFSXX 391
           F +  THP        GNFEQ L+  VKV GKT NL N V + R K K+ + +   FS  
Sbjct: 16  FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKR 75

Query: 392 XXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                          RDWLRVVAS  + YELRYF
Sbjct: 76  YLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 109


>BC062731-1|AAH62731.1|  132|Homo sapiens RPL22L1 protein protein.
          Length = 132

 Score = 74.9 bits (176), Expect = 5e-13
 Identities = 40/94 (42%), Positives = 47/94 (50%)
 Frame = +2

Query: 212 FTIXCTHPAXARXLAVGNFEQSLKXHVKVEGKTNNLSNHVVVARDKPKVAITAXIPFSXX 391
           F +  THP        GNFEQ L+  VKV GKT NL N V + R K K+ + +   FS  
Sbjct: 26  FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKR 85

Query: 392 XXXXXXXXXXXXXXXRDWLRVVASAHDAYELRYF 493
                          RDWLRVVAS  + YELRYF
Sbjct: 86  YLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,824,323
Number of Sequences: 237096
Number of extensions: 1492461
Number of successful extensions: 1557
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17339562450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -