Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F12
(1191 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64; Euk... 433 e-120
UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella ve... 329 1e-88
UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|R... 283 8e-75
UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3; Dik... 270 5e-71
UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17; Di... 261 2e-68
UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like; ... 245 2e-63
UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, who... 219 2e-55
UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 210 4e-53
UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1; Di... 202 1e-50
UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 199 1e-49
UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene pr... 197 4e-49
UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1; ... 190 8e-47
UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1; ... 175 1e-42
UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 165 2e-39
UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1; ... 157 4e-37
UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 157 5e-37
UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1; ... 156 1e-36
UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yar... 126 9e-28
UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1; ... 120 6e-26
UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n... 92 1e-25
UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2; Cryptosporid... 117 7e-25
UniRef50_A5AE01 Cluster: Putative uncharacterized protein; n=1; ... 75 5e-23
UniRef50_A7QN72 Cluster: Chromosome undetermined scaffold_131, w... 91 5e-17
UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Ere... 86 1e-15
UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=... 76 2e-12
UniRef50_Q9M0V3 Cluster: DNA damage-binding protein 1a; n=8; Vir... 75 3e-12
UniRef50_Q16531 Cluster: DNA damage-binding protein 1; n=44; cel... 74 8e-12
UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n... 71 4e-11
UniRef50_UPI0000DA4330 Cluster: PREDICTED: similar to splicing f... 69 2e-10
UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Klu... 66 1e-09
UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=... 64 7e-09
UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 64 7e-09
UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 63 2e-08
UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep... 62 2e-08
UniRef50_Q10570 Cluster: Cleavage and polyadenylation specificit... 37 1.2
UniRef50_Q9VN71 Cluster: CG14661-PA; n=4; Schizophora|Rep: CG146... 34 6.3
UniRef50_Q039S0 Cluster: Cell division protein FtsI/penicillin-b... 34 8.3
>UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64;
Eukaryota|Rep: Splicing factor 3B subunit 3 - Homo
sapiens (Human)
Length = 1217
Score = 433 bits (1067), Expect = e-120
Identities = 224/337 (66%), Positives = 256/337 (75%), Gaps = 10/337 (2%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SFV ATLVLS G V VT SGFLGT P L C +G ALVQV P G+ +RADKRVN W
Sbjct: 477 SFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEW 536
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
K PGKK++V CAVNQ QVVIALTGG LVYFEMDP+GQLNEYTE K +S+ V CM+L +V
Sbjct: 537 KTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVP 596
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIE--------QPFE 602
GEQR+ FLAVGL DNTVRIISLDP+DCL P SMQALPA ESLCI+E + E
Sbjct: 597 PGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGE 656
Query: 603 SGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVS 782
G+ L+LNIGL NGVLLRT LD V+GDL+DTRTRYLGSRPVKLF+VR+Q EAVLA+S
Sbjct: 657 RGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMS 716
Query: 783 SRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQ 962
SR+WL Y YQ+RFHLTPLSYE LE+A+GF+S QC EGIV IS+NTLRI A +KLGAVFNQ
Sbjct: 717 SRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQ 776
Query: 963 TFVPXKYTPRKL**ILXQSH--YSLXTDHXAYPEEMK 1067
P +YTPRK I +S+ + TDH AY E K
Sbjct: 777 VAFPLQYTPRKF-VIHPESNNLIIIETDHNAYTEATK 812
>UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1171
Score = 329 bits (808), Expect = 1e-88
Identities = 181/327 (55%), Positives = 218/327 (66%), Gaps = 3/327 (0%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF+ ATLVLS G V VT SGFLGT P L C +G ALVQ+ P G+ +RADKRVN W
Sbjct: 477 SFINATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIRADKRVNEW 536
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
KAPGKK++V AVN+ QVVIALTGG +VYFEMD +GQLNEYTE K +S+ V CMALG++
Sbjct: 537 KAPGKKTIVKSAVNERQVVIALTGGEVVYFEMDSSGQLNEYTERKEMSADVQCMALGTIL 596
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALH 626
GE R+ FLA+GL+DNTVRIISLDP DCL+P SMQALPA ESLCI+E + GA+S
Sbjct: 597 HGELRSRFLAIGLSDNTVRIISLDPQDCLTPLSMQALPAMPESLCIVEMGGKEGAES--- 653
Query: 627 LNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYH 806
G G+ L L + + ++ E VLA+SSR+WL Y
Sbjct: 654 -EGGSMGGLFLNIGLSEIC--------------------LTLEPGE-VLAMSSRSWLSYT 691
Query: 807 YQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKYT 986
+Q+R HLTPLSYE LEYA+GFSS QC EGIV I+ NTLRI A +KLGAVFNQ P KYT
Sbjct: 692 HQSRVHLTPLSYETLEYASGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVATPLKYT 751
Query: 987 PRKL**ILXQSHYSL---XTDHXAYPE 1058
PRK ++ +L TDH Y +
Sbjct: 752 PRKF--VIHSPTNTLVVIETDHNTYTD 776
>UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1196
Score = 283 bits (693), Expect = 8e-75
Identities = 143/305 (46%), Positives = 194/305 (63%), Gaps = 1/305 (0%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF+ ATLVLS G V+ V SG LGT L+ M +L+Q+ P GL ++ADKR+N W
Sbjct: 476 SFLNATLVLSIGDTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIKADKRINEW 535
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
+ PG+K + C N QVVIALTGG ++YFE+D GQL E E S + C+ +G V
Sbjct: 536 RTPGRKQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIE-VEKLETSGDIACLDIGPVP 594
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGA-ESLCIIEQPFESGAKSAL 623
G R FLA+G D TVR++SL+P DCL ++QAL A SL +++ + L
Sbjct: 595 EGALRNRFLAMGSYDGTVRVMSLNPDDCLQTLAVQALKGSAPSSLLVLQTAGTESTQGGL 654
Query: 624 HLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGY 803
LN+G++NGVL+R T+D VSG L+D R R+LG+R KL + V+ A A++A+SSR WLGY
Sbjct: 655 LLNVGMANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPALVALSSRPWLGY 714
Query: 804 HYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKY 983
+ F L P+SY LE F+S QC EG+V IS+ TLRI + ++LG FNQT V +Y
Sbjct: 715 SEKGTFVLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRIASIERLGENFNQTTVKLRY 774
Query: 984 TPRKL 998
TPR +
Sbjct: 775 TPRAM 779
>UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3;
Dikarya|Rep: Pre-mRNA-splicing factor RSE1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1217
Score = 270 bits (662), Expect = 5e-71
Identities = 146/326 (44%), Positives = 192/326 (58%), Gaps = 4/326 (1%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF TLVLS G + V +GFL + P L +G+A L+QV P GL +RA RV+ W
Sbjct: 496 SFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHPYGLRHIRAADRVDEW 555
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
AP +++V+ N+ QVVIAL+ LVYFE+DP G L+EY E K L C+ + V
Sbjct: 556 PAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEGSLSEYQEKKALPGNATCVTIAEVP 615
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGA---KS 617
G +R FLAVG ++ TV IISL+P L S+QAL A S+C+ E F++ ++
Sbjct: 616 EGRRRTSFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAE-IFDTSIDKNRA 674
Query: 618 ALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWL 797
+ LNIGL NGVLLRT +D V G L+DTR R+LG++P KL + VQ +V+A SSRTWL
Sbjct: 675 TMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPSVMAFSSRTWL 734
Query: 798 GYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPX 977
Y YQ+ PL Y+ LEYA S+ C +G++ IS NTLRI+ KLG Q
Sbjct: 735 LYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRIFNIPKLGEKLKQDSTAL 794
Query: 978 KYTPRKL**ILXQS-HYSLXTDHXAY 1052
YTPRK S Y + DH Y
Sbjct: 795 TYTPRKFISHPFNSVFYMIEADHRTY 820
>UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17;
Dikarya|Rep: Pre-mRNA-splicing factor rse1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1206
Score = 261 bits (640), Expect = 2e-68
Identities = 138/307 (44%), Positives = 186/307 (60%), Gaps = 3/307 (0%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF TLVLS G V ++ SGFL + L MG +LVQ+ P G+ +RA+K+ + W
Sbjct: 502 SFTNGTLVLSIGETVEEISDSGFLSSVSTLNARQMGRDSLVQIHPKGIRYIRANKQTSEW 561
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPT---GQLNEYTEXKXLSSAVCCMALG 437
K P +V A+N Q+V+AL+ G LVYFEM GQLNEY E K L++ V +ALG
Sbjct: 562 KLPQDVYVVQSAINDMQIVVALSNGELVYFEMSDDVEGGQLNEYQERKTLTANVTSLALG 621
Query: 438 SVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKS 617
V G +R+ F+ + +D TVR++SLD L S+QAL + A SLCII P S
Sbjct: 622 PVQEGSRRSNFMCLACDDATVRVLSLDLYTTLENLSVQALSSPANSLCII--PMNVNGVS 679
Query: 618 ALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWL 797
L+L+IGL NGV LRT +D SG L DTRTR+LG R VK++ + ++ VLAVSSRT+L
Sbjct: 680 TLYLHIGLMNGVYLRTVIDVTSGQLLDTRTRFLGPRAVKIYPITMKNQNTVLAVSSRTFL 739
Query: 798 GYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPX 977
Y YQ L+P++Y +++A+ F+S QC EGIV I NTL+I+ L P
Sbjct: 740 AYSYQQNLQLSPIAYSAIDHASSFASEQCPEGIVAIQKNTLKIFTVDSLQDDLKSDIYPL 799
Query: 978 KYTPRKL 998
TPRK+
Sbjct: 800 ICTPRKI 806
>UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like;
n=1; Medicago truncatula|Rep: CPSF A subunit,
C-terminal; WD40-like - Medicago truncatula (Barrel
medic)
Length = 632
Score = 245 bits (600), Expect = 2e-63
Identities = 124/263 (47%), Positives = 168/263 (63%)
Frame = +3
Query: 207 VQVSPXGLSXLRADKRVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNE 386
+QV P G+ +R D +N W+ PGK+++ N+ QVVIAL GG L+YFE+D TGQL E
Sbjct: 1 MQVHPNGIRHIREDGHINEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLME 60
Query: 387 YTEXKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAG 566
E +S V C+ + V G QR+ FLAVG D T+RI+SLDP DC+ +Q+L +
Sbjct: 61 -VEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSA 119
Query: 567 AESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKV 746
+ESL L L + SNGVL RT +D V+G L+D+R+ +LG RP KLF +
Sbjct: 120 SESL--------------LFLEVQASNGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPI 165
Query: 747 RVQAAEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRI 926
V+ A+L +SSR WLGY +Q F LTPLSYE LE+AA FSS QC EG+V ++ LRI
Sbjct: 166 VVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCVEGVVALAGEALRI 225
Query: 927 WAXKKLGAVFNQTFVPXKYTPRK 995
+ ++LG FN+T +P +YTP K
Sbjct: 226 FTIERLGETFNETVIPLRYTPMK 248
>UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1178
Score = 219 bits (534), Expect = 2e-55
Identities = 119/311 (38%), Positives = 184/311 (59%), Gaps = 7/311 (2%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
S++ TLVL G V V +G GT + + + +Q+ G +R +K +
Sbjct: 471 SYINKTLVLKIGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIRKNKPPTDY 530
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPT---GQLNEYTEXKXLSSAVCCMALG 437
GK ++ N+ QV AL GG + YFE+D T G L E T+ + + + + + LG
Sbjct: 531 IIDGK--VIKGVSNEKQVAFALAGGDVYYFELDTTSVSGNLIEITKDQ-MDNEIKALELG 587
Query: 438 SVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKS 617
+ G QR FL V L+D T+R++SL+P C +MQALP+ AESLC++E E +
Sbjct: 588 PIEEGRQRCKFLCVALSDQTIRLLSLEPESCFERGAMQALPSEAESLCMMEMASEQEGQQ 647
Query: 618 A----LHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSS 785
+ L L IGL+NG+L+RT++D +SG L+DTRTRYLG++PVK ++ +A+LA+SS
Sbjct: 648 SFTKQLFLFIGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRITANQQQAMLALSS 707
Query: 786 RTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQT 965
R+WL Y+ R + PLSY+ L+YA+ F + + +GIV + +TLRI ++ G +FNQ
Sbjct: 708 RSWLCYNNSGRIFMQPLSYDYLDYASAFLAKE-FQGIVGTNQSTLRIIMPERFGEIFNQQ 766
Query: 966 FVPXKYTPRKL 998
+ Y+PRK+
Sbjct: 767 SLDLTYSPRKM 777
>UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Babesia bovis|Rep: Splicing factor 3b,
subunit 3, 130kD, putative - Babesia bovis
Length = 1169
Score = 210 bits (514), Expect = 4e-53
Identities = 129/305 (42%), Positives = 173/305 (56%), Gaps = 2/305 (0%)
Frame = +3
Query: 90 FVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAWK 269
F TLVLS G V VT S FL + L MG + +QV G+ + D +V WK
Sbjct: 478 FEGNTLVLSVGEAVEEVTDSCFLTSITTLHVSMMGDGSYIQVHDGGVRHVY-DMKVREWK 536
Query: 270 APGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVAA 449
P K + A NQ Q+V+AL+GG LVYFE+D + L E + + L+ + C++L A
Sbjct: 537 TPTAKRVKVAASNQHQLVLALSGGELVYFELDESHTLVEVAK-RSLNVEITCLSLQPTAK 595
Query: 450 GEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGA--ESLCIIEQPFESGAKSAL 623
G A F++VG DN VR++SLD L S Q LP + ES+CI E F+ G L
Sbjct: 596 GRLMANFMSVGALDNLVRVLSLDRQ--LKQYSTQLLPNNSTPESVCIAE--FQIGTHPVL 651
Query: 624 HLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGY 803
L +GL+ GV++R T+D+VSG L+D TR+LGSR VK ++ Q V+ S R WL Y
Sbjct: 652 MLVVGLNTGVMIRATIDAVSGALSDQYTRFLGSRAVKFKYIKNQ----VIGTSDRPWLLY 707
Query: 804 HYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKY 983
YQ PLSY+ LE A FSS C +G V IS + LRI+ +LG F++ +P Y
Sbjct: 708 EYQGVVQCLPLSYDTLESVASFSSPLCNDGYVAISGSNLRIFRCCRLGETFSEHRLPLDY 767
Query: 984 TPRKL 998
TPRKL
Sbjct: 768 TPRKL 772
>UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: CPSF domain-containing
protein - Dictyostelium discoideum AX4
Length = 1256
Score = 202 bits (493), Expect = 1e-50
Identities = 129/333 (38%), Positives = 180/333 (54%), Gaps = 30/333 (9%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SFV T VLS G + SG L T L +MG A++QV P G +++D R+N W
Sbjct: 494 SFVGTTSVLSVGDTIQENHESGILETTTTLLVKSMGDDAIIQVFPTGFRHIKSDLRINEW 553
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
+APG+K++V + NQSQ+ IAL+GG ++YFE+D L E + K L + C+ + +
Sbjct: 554 RAPGRKTIVRASANQSQLAIALSGGEIIYFELDQASNLIEIIK-KDLRRDIACIEISPIP 612
Query: 447 AGEQRAWFLAVGL-----------NDNTVRIISLDPAD-----CLSPRSMQALPAGAESL 578
G A F+AV DN + +S+ D LS MQ G E+
Sbjct: 613 KGRNMARFIAVSDWEGPIRVLSLDRDNCLGQVSMLDTDKVYIESLSIIEMQLNEMGIETK 672
Query: 579 CIIEQPFE--------SGAKSA------LHLNIGLSNGVLLRTTLDSVSGDLADTRTRYL 716
Q + S A S+ L L +GL NGV+ R TLDSV+G+L+D RTR L
Sbjct: 673 KSQSQTGQTTTTTTSTSSASSSVTSGGSLFLFVGLKNGVVKRATLDSVTGELSDIRTRLL 732
Query: 717 GSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGI 896
G +PVKLFKV+V+ + A+LA+SSR WL Y Q + + PLS E LE A+ SS Q E I
Sbjct: 733 GRKPVKLFKVKVRGSNAMLALSSRVWLNYINQGKLDIVPLSIEPLENASNLSSEQSAESI 792
Query: 897 VXISSNTLRIWAXKKLGAVFNQTFVPXKYTPRK 995
V S N + I++ KLG +FNQ + TP++
Sbjct: 793 VATSENKIIIFSIDKLGDLFNQETIKLNATPKR 825
>UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Plasmodium falciparum 3D7|Rep: Splicing
factor 3b, subunit 3, 130kD, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1329
Score = 199 bits (485), Expect = 1e-49
Identities = 112/309 (36%), Positives = 176/309 (56%), Gaps = 5/309 (1%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF TL+L G V V+ + L L + + + +QV G+ + K V W
Sbjct: 509 SFEGNTLILEIGESVEEVSDTLLLNNVTTLHINILYDNSFIQVYDTGIRHING-KVVQEW 567
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
AP K + + + N SQ+VI+L+GG L+YFE+D + L E K L+ V C+++ +
Sbjct: 568 VAPKNKQIKAASSNSSQIVISLSGGELIYFEIDESHTLVEIFR-KNLNVEVLCLSIQQIP 626
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALP--AGAESLCIIEQPFESGA--- 611
RA FLAVG DN VR++S++ S LP + + +CI E
Sbjct: 627 PNRVRANFLAVGCLDNVVRLLSIEKDKYFKQLSTHLLPNNSSPQDICISEMNDNGNTMKE 686
Query: 612 KSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRT 791
++ + LNIGL+ GVLLR+ +D V+G L++ ++YLG++ +K+ V V A+L + +T
Sbjct: 687 RNIIFLNIGLNTGVLLRSIIDPVAGTLSNHYSKYLGAKSIKICPVNVNKNPALLVLCEKT 746
Query: 792 WLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFV 971
+L Y +Q +F +PL+Y+ LEYA+ F S QC++G V ISSN+LRI+ +LG VF+Q +
Sbjct: 747 YLCYMHQGKFLYSPLNYDMLEYASSFYSPQCSDGYVAISSNSLRIFRFYRLGEVFSQNIL 806
Query: 972 PXKYTPRKL 998
+TPRK+
Sbjct: 807 HLTFTPRKI 815
>UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene
product; n=10; Plasmodium|Rep: Drosophila melanogaster
CG13900 gene product - Plasmodium yoelii yoelii
Length = 1235
Score = 197 bits (481), Expect = 4e-49
Identities = 110/308 (35%), Positives = 175/308 (56%), Gaps = 4/308 (1%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF TL+L G V V S L + + + + +QV G+ + K V W
Sbjct: 477 SFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHING-KIVQEW 535
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVA 446
P K + + N SQ+V++L+GG L+YFE+D + L E K ++ + C+++ +
Sbjct: 536 IPPKNKQINAATSNGSQIVVSLSGGELIYFEIDESHTLTEIFR-KNINVEILCLSIQQIQ 594
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALP--AGAESLCIIEQPFESGAK-- 614
+ RA FLAVG DN VR++S++ S LP + + +CI E K
Sbjct: 595 QNKLRASFLAVGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKELGNQKEH 654
Query: 615 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTW 794
+ L+LNIGL+ GVLLR+ +D + G L++ ++YLG++ VK+ V+V A+L +S +T+
Sbjct: 655 TILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPALLVLSEKTY 714
Query: 795 LGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVP 974
L Y YQ ++ +PL+Y+ LEYA+ F S QC++G V IS N+LRI+ +LG VF+Q +
Sbjct: 715 LCYVYQGKYIYSPLNYDVLEYASSFYSEQCSDGYVAISGNSLRIFRFYRLGEVFSQNILH 774
Query: 975 XKYTPRKL 998
+TPRK+
Sbjct: 775 LTFTPRKI 782
>UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1273
Score = 190 bits (462), Expect = 8e-47
Identities = 113/315 (35%), Positives = 165/315 (52%), Gaps = 16/315 (5%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADK---------- 251
TLVL G V + +GF+ L G ++QV P G+ ++ +
Sbjct: 495 TLVLKIGEDVEEASNTGFMADTNTLGVQQFGEDCIIQVHPKGIRHIQGIQFPEDGAVATH 554
Query: 252 -RVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCM 428
+ W+ P +++V+CA N QV IAL+ G ++YFE D G L E L S + C+
Sbjct: 555 TSLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDADGSLAMAEEEIALDSTINCL 614
Query: 429 ALGSVAAGEQRAWFLAVGLNDNTVRIISLDP---ADCLSPRSMQALPAGAESLCIIEQPF 599
A+ V G RA+F+AVG +D TVRI +L P + L S+QAL + L I
Sbjct: 615 AIPDVPEGSVRAFFMAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSGLTINMMSD 674
Query: 600 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 779
+S + L+IGL +GV +R+ LD ++GD+ DTR R+LG P+K KV V A+LA+
Sbjct: 675 KSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPAILAM 734
Query: 780 SSRTWLGYHYQNR--FHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAV 953
+SR WLGY + LTPL+Y + A F Q +GI+ +S+N LRI+ L
Sbjct: 735 TSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNFEGSQ-FKGIICVSANELRIFTFNDLTDN 793
Query: 954 FNQTFVPXKYTPRKL 998
+ KYTPRK+
Sbjct: 794 TTYETIQLKYTPRKM 808
>UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1223
Score = 175 bits (427), Expect = 1e-42
Identities = 112/312 (35%), Positives = 167/312 (53%), Gaps = 13/312 (4%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRA----DKRVNAWK 269
TLV S G + VT S F+ P + +G A++VQ+ GL + K+V W
Sbjct: 478 TLVFSIGESLEDVTDSKFVLDQPTIAVQQVGKASVVQIYAYGLRHISTKIGNSKKVTDWY 537
Query: 270 APGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTG-QLNEYTEXKXLSSAVCCMALGSVA 446
P S+V A N QV+IAL+ +VYFE DPT QL EY E ++S V M +
Sbjct: 538 PPAGISIVHAATNNKQVLIALSNSEVVYFETDPTDDQLLEYQEKLEVTSPVTSMTISP-- 595
Query: 447 AGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALH 626
+R+ F +G +D T+++ISL P CL +S+QAL + A SL ++ + +
Sbjct: 596 ---ERSSFAIIGCSDETIQVISLQPQSCLEVKSLQALSSKANSLAMLTN------ERTTY 646
Query: 627 LNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRV-QAAEAVLAVSSRTWLGY 803
++IG+ NGV RT +D SG L+DTR +YLGS+P+ L V++ + E +LA+SSRTW +
Sbjct: 647 VHIGMENGVYARTKIDKFSGKLSDTRVKYLGSKPIALEHVKLSEEVEGILAISSRTWAAF 706
Query: 804 HYQNRFHLTPLSYECLEYAAGFSSXQC-TEGIVXISSNTLRIWAXKKLGAVF--NQTF-- 968
HY+ + + PL +++ A S E IV N L I + + ++F NQT
Sbjct: 707 HYRGTYKIIPLLGVDIDHGACIISEDIGGEAIVGTKGNNLVILSAGEEDSLFDPNQTVTV 766
Query: 969 --VPXKYTPRKL 998
+Y PRKL
Sbjct: 767 VSTNLRYQPRKL 778
>UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
albicans|Rep: Pre-mRNA-splicing factor RSE1 - Candida
albicans (Yeast)
Length = 1219
Score = 165 bits (401), Expect = 2e-39
Identities = 102/311 (32%), Positives = 174/311 (55%), Gaps = 12/311 (3%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRA---DKRVNAWKA 272
TLVLS G V V S F+ P + +G A++VQ+ G+ +R +K+ W
Sbjct: 510 TLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQIYSNGIKHVRTVNGNKKTTDWFP 569
Query: 273 PGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTG-QLNEYTEXKXLSSAVCCMALGSVAA 449
P ++ N QV+IAL+ +VYFE+D T QL EY + +++ + MA+ +
Sbjct: 570 PAGITITHATTNNQQVLIALSNLSVVYFEIDATDDQLIEYQDRLEIATTITAMAIQENIS 629
Query: 450 GEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALHL 629
+++ F +G +D T++++SL +CL +S+QAL A + SL +++ SG ++ H+
Sbjct: 630 --EKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQALSANSSSLKMLKS---SGKET--HV 682
Query: 630 NIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRV-QAAEAVLAVSSRTWLGYH 806
+IG+ NGV R +D+++G+L+++R +Y+GS+PV L ++ E +LA+SS W+ Y
Sbjct: 683 HIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVIKFSNEIEGILAISSAPWISYL 742
Query: 807 YQNRFHLTPLSYECLEYAAGFSSXQC-TEGIVXISSNTLRIWAXKKLGAVFNQT------ 965
Y++ F +TPL + + F S EGIV I N L I++ K +VF+ +
Sbjct: 743 YRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDNNLIIFSVGKEDSVFDPSQDLTIA 802
Query: 966 FVPXKYTPRKL 998
+YTPRK+
Sbjct: 803 TTKLRYTPRKM 813
>UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 979
Score = 157 bits (382), Expect = 4e-37
Identities = 94/235 (40%), Positives = 132/235 (56%), Gaps = 1/235 (0%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAWKAPGK 281
TLVLS G V V+ SGFL + L +G +L QV P G+ +R+ ++ W AP
Sbjct: 269 TLVLSIGEEVKQVSDSGFLTSVSTLAIQQIGDDSLAQVHPKGIRHIRSSDQIIEWPAPQH 328
Query: 282 KSLVSCAVNQSQVVIALTGGXLVYFEMDPT-GQLNEYTEXKXLSSAVCCMALGSVAAGEQ 458
+++V+ A NQ QV +AL+ G ++YFE+D G L EY + +S V C++LG V G
Sbjct: 329 RTIVATATNQRQVAVALSSGEIIYFELDDADGSLAEYDGREEMSGTVTCLSLGQVPEGRL 388
Query: 459 RAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALHLNIG 638
R+ FLAVG +D T+RI+SLDP L RS+QAL A +L II P + +G
Sbjct: 389 RSSFLAVGCDDRTIRILSLDPESTLESRSVQALTAAPSALAII--PMDDSL-------LG 439
Query: 639 LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGY 803
SN +DT ++LG RPV+LF V V+ VLA+SS+ WLG+
Sbjct: 440 GSNS--------------SDTNYKFLGVRPVRLFPVTVKQKPRVLALSSKAWLGH 480
>UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomycetaceae|Rep: Pre-mRNA-splicing factor RSE1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1256
Score = 157 bits (381), Expect = 5e-37
Identities = 103/322 (31%), Positives = 172/322 (53%), Gaps = 23/322 (7%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLR-------ADKRVN 260
TLVLS G V V S F+ P + +G +++VQ+ G+ ++ +K+
Sbjct: 496 TLVLSIGEVVEEVNDSQFVTNEPTINVQQVGKSSVVQIYSNGIRHIKHTMRNDTIEKKYT 555
Query: 261 AWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDP-TGQLNEYTEXKXLSS-AVCCMAL 434
W P S++ + N QV+I L+ + YFE+DP QL EY E +S ++ +A+
Sbjct: 556 DWYPPAGISIIQASTNNEQVIIGLSNREICYFEIDPHDDQLVEYQERLEMSGGSISALAI 615
Query: 435 GS--VAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESG 608
S ++ ++++ + VG +D T++ ISL P +CL ++QAL A + S+ ++ G
Sbjct: 616 SSSSISKLQRKSSYAIVGCSDETIQAISLKPHNCLEIVTLQALSANSSSIAMVPH----G 671
Query: 609 AKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAE--AVLAVS 782
+++H IG+ NG+ +R T+D ++G L+DTR ++LGS+PV+L + + + +LA+S
Sbjct: 672 YSTSVH--IGMENGLYVRVTIDEITGKLSDTRIQFLGSKPVQLSVIGLPQLQQNGLLAIS 729
Query: 783 SRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQC-TEGIVXISSNTLRIWA-----XKKL 944
SR W+GY+ + F +TPL + A F S EGIV I N L I ++
Sbjct: 730 SRPWIGYYSKGDFKMTPLLNTNISNGASFYSEDIGGEGIVGIDDNNLIILTISNTDGEES 789
Query: 945 GAVFNQTF----VPXKYTPRKL 998
G N F V +Y PRK+
Sbjct: 790 GLNVNDDFIINSVKLRYLPRKM 811
>UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1206
Score = 156 bits (378), Expect = 1e-36
Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%)
Frame = +3
Query: 102 TLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRAD-------KRVN 260
TLVL+ G V V S F+ P + +G +L+Q+ G+ +R K+
Sbjct: 487 TLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTETEGKITKKTF 546
Query: 261 AWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTG-QLNEYTEXKXLSSA-VCCMAL 434
W P +++S + NQ QV+I L+ L YFE+DPT QL EY E +S +C +AL
Sbjct: 547 DWYPPAGITIISASTNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIEMSGGQICALAL 606
Query: 435 GS--VAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESG 608
S V ++++ F V D TV++ISL +CL + QAL A S II
Sbjct: 607 ASSFVNKSQRKSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTSAVIISN----- 661
Query: 609 AKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAE--AVLAVS 782
+++L ++GL NG+ +R+TL+S++G +DTR +YLG+ VKL + ++ + VLAVS
Sbjct: 662 -ETSLVAHLGLENGLYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQLQQVGVLAVS 720
Query: 783 SRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIW 929
+ WL Y +N+ +TPL ++ F S + EGIV S++ L I+
Sbjct: 721 TYPWLCYRSKNKTRITPLMGANIKCGTSFYSEEIGEGIVGASASELTIF 769
>UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yarrowia
lipolytica|Rep: Pre-mRNA-splicing factor RSE1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 1143
Score = 126 bits (305), Expect = 9e-28
Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 21/302 (6%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
S+ ATLVL G V T+SG P L C ++G ++ VQV G++ + + ++
Sbjct: 475 SYANATLVLEIGDSVVETTSSGLTLDKPTLHCGSVG-SSYVQVMTDGMNVIPMSREGSSE 533
Query: 267 KAPGKK-----SLVSCAVNQS-QVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCM 428
P K V CA + S QVV+ LT L YFE P +L+ Y LSS +
Sbjct: 534 SLPATKWTAPSGQVICASSSSHQVVLGLTSS-LFYFEDTPGSELSAYDGAYELSSPPTAV 592
Query: 429 ALGSVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESG 608
A+ V AG R+ F+AV +D TVRI+S+DP ++Q L A A SL ++
Sbjct: 593 AVAPVPAGRVRSPFVAVATDDETVRIVSVDPESMFETVAVQGLMATASSLALL------S 646
Query: 609 AKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVS-- 782
L+L++GL+NGV +R LD ++G++ + ++++G + + V E++L S
Sbjct: 647 VGQVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFVGLGRLSVVPVTCGGEESILVSSRG 706
Query: 783 -----------SRTWL--GYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLR 923
S TW+ G + F L +S E L+ A F + C G++ ++ +TL+
Sbjct: 707 VKTCLGHVNATSDTWVPTGGNSAPFFALDAISGEPLDLAHSFHTQDCPHGVIGVAGSTLK 766
Query: 924 IW 929
I+
Sbjct: 767 IF 768
>UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1231
Score = 120 bits (290), Expect = 6e-26
Identities = 106/333 (31%), Positives = 164/333 (49%), Gaps = 29/333 (8%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLR-CH------AMGHAALVQVSPXGLSXLRA 245
SF TLVLS G V VT S FL + L CH ++G VQV G L
Sbjct: 478 SFQGNTLVLSIGEAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDGGFRYLTG 537
Query: 246 DKRVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTE--XKXLSSAV 419
D V WK K + N +Q+V+ LTGG ++YF++ L E E + LS+ V
Sbjct: 538 DV-VKEWKVQTTKRVKLADNNNTQLVLVLTGGEVIYFQLTEADVL-ELVEVGRRNLSTEV 595
Query: 420 CCMALGSVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPF 599
C+A+ +G +A F G DN VR++ LD L + + ES+ ++
Sbjct: 596 TCLAVQHQVSG-NKAEFCCCGSIDNIVRVMKLDKTLKLCSSQILGNNSLPESVALLTTSV 654
Query: 600 ESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAV 779
+ L+L +GL+NGVL+R T+D V+G+L+D +R+LG++P++L V+ + +L +
Sbjct: 655 DE-----LYLYVGLNNGVLIRNTVD-VAGNLSDQESRFLGAKPLRLKLVQYLDRQCLLLL 708
Query: 780 SSRTWL---GYH------------YQNRFHLT-PLSYE----CLEYAAGFSSXQCTEGIV 899
+ +T++ Y Y N + T LS ++ F+S C G V
Sbjct: 709 TVKTFIVVPNYPTSGNGNLEILPVYINSTNATVTLSPSNAMLSVDSIDTFNSLLCLNGFV 768
Query: 900 XISSNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
I N+L+I+ G VF++ +P +YTPRKL
Sbjct: 769 SILGNSLKIFRCLVNGDVFSEITIPLEYTPRKL 801
>UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n=1;
Theileria annulata|Rep: Splicing factor 3b subunit,
putative - Theileria annulata
Length = 1340
Score = 91.9 bits (218), Expect(3) = 1e-25
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Frame = +3
Query: 207 VQVSPXGLSXLRADKRVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNE 386
VQ+ G L D + WK K + N +Q+++ LTGG ++YF++ T ++ E
Sbjct: 606 VQIHDGGYRYLSGDI-IKEWKVQSTKRVKLADNNDTQLILVLTGGEIIYFQLTDT-EVPE 663
Query: 387 YTE--XKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSMQALP 560
E + LS+ + C+A+ +G +A F G DN VRI+ LD L +
Sbjct: 664 LVEVGRRNLSTEITCLAIQHPNSG-TKAEFCCCGSIDNIVRIMKLDKNLKLCSSQILGNN 722
Query: 561 AGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLF 740
+ ES+ ++ ++L +GL+NGVL+R TLD + G+L D +R++G++P+KL
Sbjct: 723 SLPESVTLL-------TNDEIYLYVGLNNGVLIRNTLDMI-GNLIDQESRFMGTKPLKLK 774
Query: 741 KVRVQAAEAVLAVSSRTWL---GYHYQNRFHLTPL 836
++ + ++ +S +T++ Y N + PL
Sbjct: 775 LLQYMEKQCLILMSIKTYIIIPNYPNNNNLDILPL 809
Score = 40.3 bits (90), Expect(3) = 1e-25
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 867 FSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
F+S C G V I N L+I+ G VF++ +P +YTPRKL
Sbjct: 844 FNSLLCLNGFVCILGNNLKIFRCIINGDVFSEITIPLEYTPRKL 887
Score = 28.7 bits (61), Expect(3) = 1e-25
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXG 227
SF TLVLS G V VT S FL + L C M + V S G
Sbjct: 531 SFQGNTLVLSIGEAVEEVTDSFFLTSITTLHCCYMSYRNGVSSSGVG 577
>UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2;
Cryptosporidium|Rep: CG13900 gene product -
Cryptosporidium hominis
Length = 1318
Score = 117 bits (281), Expect = 7e-25
Identities = 86/321 (26%), Positives = 161/321 (50%), Gaps = 17/321 (5%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAM-GHAALVQVSPXGLSXLRADKRVNA 263
SF+ +LVL+ G V + F + +M + + +QV + + D R+
Sbjct: 485 SFIDRSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLIIQD-RIYD 543
Query: 264 WKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQ-------LNEYTEX--KXLSSA 416
WK P + +++ N QV +AL GG +V E++ G + E + ++
Sbjct: 544 WKTPDSRKIIAADSNGRQVSLALEGGLIVILELNVNGVSGITNTGIGGLVEVCRREITCE 603
Query: 417 VCCMALGSVA-AGEQRAWFLAVGLN-DNTVRIISLDPADC-LSPRSMQALPAGAESLCII 587
+ C+ + ++ +G+ R+ ++ VG + +N +R+ +D A+ L Q LP + S+
Sbjct: 604 IICIGIQQLSYSGQMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILP-NSNSIPEN 662
Query: 588 EQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQ---A 758
Q + S L L +GL+ GV+L +D+ +G ++D R++YLG+R V + ++ +
Sbjct: 663 VQLYHSNKYGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRIMREDFGG 722
Query: 759 AEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIW-AX 935
+++ +SSR WL + + TPL Y C++ A ++ Q G V +S +TL I+
Sbjct: 723 EMSLVCMSSRPWLVDSQTSGVNFTPLQYRCIDSIAPLNTHQVNNGYVAVSGSTLLIFQVT 782
Query: 936 KKLGAVFNQTFVPXKYTPRKL 998
+ G F+Q+ + YTPRKL
Sbjct: 783 QGFGESFSQSSINLSYTPRKL 803
>UniRef50_A5AE01 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 289
Score = 74.9 bits (176), Expect(2) = 5e-23
Identities = 56/152 (36%), Positives = 72/152 (47%)
Frame = +3
Query: 291 VSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVAAGEQRAWF 470
V N+ QVVIAL+ G L+YFE+D T QL E E +S V C + V G R+ F
Sbjct: 4 VKVGPNRLQVVIALSKGELIYFEVDMTSQLME-VEKYEMSGDVACSDIAPVPKGRXRSRF 62
Query: 471 LAVGLNDNTVRIISLDPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALHLNIGLSNG 650
L VG D T+ I+SLDP D + SMQ++ ESL
Sbjct: 63 LTVGSXDYTIHILSLDPDDYMQILSMQSVSFPPESLSQFRH------------------- 103
Query: 651 VLLRTTLDSVSGDLADTRTRYLGSRPVKLFKV 746
R +D +G L+D R+R LG R K F V
Sbjct: 104 --XRIVVDMATGQLSDARSRSLGLRAPKPFYV 133
Score = 56.8 bits (131), Expect(2) = 5e-23
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +3
Query: 849 LEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
LE+AA FS C EG+V I+ + LR++ ++LG FN+T +P + TPR++
Sbjct: 136 LEFAASFSFDXCAEGVVAIAGDALRVFTIERLGXTFNETMIPSRXTPRRV 185
>UniRef50_A7QN72 Cluster: Chromosome undetermined scaffold_131,
whole genome shotgun sequence; n=6; core
eudicotyledons|Rep: Chromosome undetermined
scaffold_131, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 327
Score = 91.1 bits (216), Expect = 5e-17
Identities = 45/112 (40%), Positives = 64/112 (57%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRVNAW 266
SF ATL+ S G V V+ SGFL T L +G +L+Q+ G+ +R +R+N W
Sbjct: 27 SFANATLMPSIGDEVEKVSDSGFLDTTLSLAVSLIGDDSLMQIHNSGIRHIREGRRINEW 86
Query: 267 KAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVC 422
+ PGK+++V N+ QV A +GG L+YFEMD TGQL E + + C
Sbjct: 87 RTPGKRTIVKVGSNRLQVAFAPSGGELIYFEMDMTGQLMEVEKHEMSGDEAC 138
>UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Eremothecium gossypii|Rep: Pre-mRNA-splicing factor RSE1
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 1288
Score = 86.2 bits (204), Expect = 1e-15
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Frame = +3
Query: 264 WKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSV 443
W P ++ + N +Q+++AL+ +VYFE+ LNE + + + +A+G+
Sbjct: 561 WFPPAGICILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN- 619
Query: 444 AAGEQRAWFLAVGLNDNTVRIISL---DPADCLSPRSMQALPAGAESLCIIEQPFESGAK 614
R+ ++ + D+TV++ SL D A+ L SMQ L + A SL Q SG
Sbjct: 620 ---GNRSDYMIIASVDSTVKVYSLKVQDQANFLEVVSMQVLVSPASSL----QLASSGGS 672
Query: 615 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKL 737
LH IGL +GV +R+ LD +G+L D RT+YLG++PV++
Sbjct: 673 LCLH--IGLDSGVYVRSKLDRNTGELFDVRTKYLGTKPVEI 711
>UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1145
Score = 75.8 bits (178), Expect = 2e-12
Identities = 59/218 (27%), Positives = 97/218 (44%)
Frame = +3
Query: 345 LVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISLDPA 524
L+YF+ +G L E K S + +AL + A+G D +V ++SL P
Sbjct: 554 LIYFQYQ-SGHLLTM-ERKDNLSKITALALDQFHPSKH----CAIGCIDGSVHLLSLIPN 607
Query: 525 DCLSPRSMQALPAGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTR 704
+ S +L C I + + +L GLSNG+L R+ D +SG++ ++
Sbjct: 608 ETTKALSRVSLQTYE---CSINSLTFNIIDNTSYLFAGLSNGLLGRSVYDPISGEINESS 664
Query: 705 TRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQC 884
++GSRPV L V+ ++VLA+S R+ L Y + TPL+ + A G
Sbjct: 665 LNFVGSRPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFV 724
Query: 885 TEGIVXISSNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
I I ++I + + + YTPRK+
Sbjct: 725 DNAIAIICEKVMKIITIESTSSSLTGKNIQISYTPRKV 762
>UniRef50_Q9M0V3 Cluster: DNA damage-binding protein 1a; n=8;
Viridiplantae|Rep: DNA damage-binding protein 1a -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1088
Score = 75.4 bits (177), Expect = 3e-12
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 7/287 (2%)
Frame = +3
Query: 87 SFVXATLVLSXGAP--VASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKRV- 257
SF+ T +L+ + GFL L CH + LVQV+ + + + R
Sbjct: 420 SFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTREL 479
Query: 258 -NAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMAL 434
+ W AP ++ N SQV++A GG LVY E+ G+L E + L V C+ +
Sbjct: 480 RDEWHAPAGFTVNVATANASQVLLATGGGHLVYLEIG-DGKLTE-VQHALLEYEVSCLDI 537
Query: 435 GSVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSM--QALPAGAESLCIIEQPFES 605
+ + AVG+ D +VRI SL ++ + + +P LC E
Sbjct: 538 NPIGDNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSV-LLCAFE----- 591
Query: 606 GAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSS 785
+L L +G LL +D+ +G L D + LG++P+ L ++A V A S
Sbjct: 592 ---GISYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASD 648
Query: 786 RTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRI 926
R + Y + + ++ + + + F+S + + L I
Sbjct: 649 RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTI 695
>UniRef50_Q16531 Cluster: DNA damage-binding protein 1; n=44; cellular
organisms|Rep: DNA damage-binding protein 1 - Homo
sapiens (Human)
Length = 1140
Score = 73.7 bits (173), Expect = 8e-12
Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 6/310 (1%)
Frame = +3
Query: 87 SFVXATLVLSX-GAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGLSXLRADKR--V 257
SFV T VL G V GF+ C + H L+Q++ + + + + V
Sbjct: 428 SFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV 487
Query: 258 NAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALG 437
+ WK P K++ + N SQVV+A+ G L Y ++ P +L + + + + V C+ +
Sbjct: 488 SEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQ-ELRQISHTE-MEHEVACLDIT 544
Query: 438 SVAAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPFESG 608
+ + A+GL D + RI+ L + L + G E + I+ FE
Sbjct: 545 PLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML-----GGEIIPRSILMTTFE-- 597
Query: 609 AKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSR 788
S+ +L L +G L L+ +G L+D + LG++P L R + V A S R
Sbjct: 598 --SSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDR 655
Query: 789 TWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQTF 968
+ Y ++ + ++ + + Y +S + + +++TL I ++ + +T
Sbjct: 656 PTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRT- 714
Query: 969 VPXKYTPRKL 998
VP +PRK+
Sbjct: 715 VPLYESPRKI 724
>UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1346
Score = 72.9 bits (171), Expect = 1e-11
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Frame = +3
Query: 186 AMGHAALVQVSPXGLSXLRADKRVNA------WKAPGKKSLVSCAVNQSQVVIALTGGXL 347
A+G +++QV + + DK W P +V + +SQ+V+AL+ +
Sbjct: 536 AIGERSIIQVCENEVRQIVYDKDQQTYVSKLDWYPPAGIRIVCASSTKSQLVLALSNCEI 595
Query: 348 VYFEMDPTGQ---LNEYTEXKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISL- 515
VYFE++ Q LNE + + ++L + R+ +LAVGL ++ V+I+SL
Sbjct: 596 VYFEIEVDSQNDSLNELQSRADMGDLITSISLSNT----NRSEYLAVGLKNSLVKILSLS 651
Query: 516 --DPADCLSPRSMQALPAGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGD 689
D S+QA+ + + II+ G LH +GL +GV LR+ L G
Sbjct: 652 LNDTETFFEVVSIQAVMSSVSDIRIIQ-----GLDMELH--VGLKDGVYLRSKLSVTDGQ 704
Query: 690 LADTRTRYLGSRPVKLF 740
+ D RT+Y+G PV +
Sbjct: 705 IYDIRTKYMGPEPVLFY 721
>UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n=1;
Trichomonas vaginalis G3|Rep: CPSF A subunit region
family protein - Trichomonas vaginalis G3
Length = 1142
Score = 71.3 bits (167), Expect = 4e-11
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 10/277 (3%)
Frame = +3
Query: 198 AALVQVSPXGLSXLRADKRVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQ 377
++L Q++ G+ + DK + WK ++ N SQ+ I +V FE D T
Sbjct: 513 SSLAQITTEGMRIIN-DKEKHDWKRDESSKIICVTANPSQIAIVYDDNQIVLFETDETSL 571
Query: 378 LNEYTEXKXLSSA--VCCMALGSVAAGEQRAWFLAV-GLND--NTVRIISLD-PADCLSP 539
E + K + A + +AL G + +LAV +ND + V I+++ + S
Sbjct: 572 PKEVSSNKVMEIAGQITSIALPQPQTGVRYVEWLAVSAVNDGLSIVYIVNISKTTEMWSV 631
Query: 540 RSMQALPAGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLG 719
S Q L S+ + F G + LH IG + G+L RT LD +G L + ++LG
Sbjct: 632 SSRQILDKTVISMMFL---FVPGIGNILH--IGHNEGLLTRTNLDDSNGSLDNATLKFLG 686
Query: 720 SRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNRFHLTPLS----YECLEYAAGFSSXQCT 887
+ PV + V+ ++L + W Y L LS C +Y A F
Sbjct: 687 NAPVTFSRCEVKNQNSILINCASPW----YTKGLSLVQLSSSPFVSCCQYKAPFF---ID 739
Query: 888 EGIVXISSNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
+ + +++N + ++ + + + TPR++
Sbjct: 740 DSFIGLTTNNMVLFYTPDKNILIDTQTLDLDMTPRQI 776
>UniRef50_UPI0000DA4330 Cluster: PREDICTED: similar to splicing factor
3b, subunit 3; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to splicing factor 3b, subunit 3 - Rattus
norvegicus
Length = 1216
Score = 69.3 bits (162), Expect = 2e-10
Identities = 88/286 (30%), Positives = 115/286 (40%), Gaps = 11/286 (3%)
Frame = +1
Query: 259 MHGRLLXKNL*SAVQSIKAKSSLP*LEGXWYISKWTLLDSSMNTQKXXNYLQLFV--VWH 432
M GRLL + +VQ K P L W IS+W L DS M+T+ Q++ VW
Sbjct: 533 MSGRLLARRQLXSVQXTSDKWXSPXLGESWSISRWILQDSXMSTRSGKKCQQMWCAXVWP 592
Query: 433 *VQLQQGNREHGF*QLVSMITLSELSLWTQQTVFHHVLCKLF-----LLVQSHYALLSNH 597
L+ N G TLSE S T QTV +C+L L V + N
Sbjct: 593 TYPLE--NSGLGSWLWGWWTTLSESSPLTHQTVCSLXVCRLSQPSLSLCVLWKWVGPRNK 650
Query: 598 LNLVQ---NLPCI*TLV*ATGCC*ELP*IL*AAILQTLELDTWGQDXXXXXXXXXXXXXX 768
++ V+ + C TL T CC L L T L WG
Sbjct: 651 MSWVRGALSASCTXTLDSRTVCCXGLSXTLLLGTCLTPALGIWGPVLXSSFGFGCKARRL 710
Query: 769 XXXCRLEHG*DITIKIVFTLHLYLMNVWNMQQDLVXNNVLKALXPYLQTL*EFGLXKNWE 948
C + HG + L LM WN+ + L N+VLKA P TL F ++
Sbjct: 711 FWLCLVAHGXATLTSLDSISPLCLMRPWNLHRALPLNSVLKASLPSPPTLXGFWHXRSLA 770
Query: 949 LYSIKHLSLXNTHQESYNK-F*XNHIIVXKLITXPTXRK*KXXXNS 1083
L SIK L +TH S + + + IT PT R K +S
Sbjct: 771 LSSIKWPFLCSTHPGSLSSTLRVTTLSSXRRITMPTLRLQKLRESS 816
Score = 58.4 bits (135), Expect = 3e-07
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +3
Query: 87 SFVXATLVLSXGAPVASVTASGFLGTPPPLRCHAMGHAALVQVSPXGL 230
SFV ATLVLS G V VT SGFLGT P L C +G ALVQV P G+
Sbjct: 477 SFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGI 524
>UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Kluyveromyces lactis|Rep: Pre-mRNA-splicing factor RSE1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1269
Score = 66.5 bits (155), Expect = 1e-09
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Frame = +3
Query: 264 WKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSV 443
W P +V+ N++Q+V+ALT + YFE+ LNE + + S V +AL
Sbjct: 564 WYPPAGVGIVTAFCNETQLVVALTNHEICYFEIIEDS-LNELQDRVEMDSTVNSIAL--- 619
Query: 444 AAGEQRAWFLAVGLNDNTVRIISLDPA--DCLSPRSMQALPAGAESLCIIEQPFESGAKS 617
AG Q++ + +G D++++I++L D + ++Q+L + SL + S
Sbjct: 620 LAG-QKSGYCVLGCEDSSLQILNLQSKHPDFFTICAIQSLISKPHSLLFMRDT------S 672
Query: 618 ALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKL 737
L +++G+ +GV L + L+ G + D RTR++G++PV++
Sbjct: 673 DLKIHVGMKSGVYLSSKLNINDGTVFDVRTRFVGTKPVQV 712
>UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3b
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1108
Score = 64.1 bits (149), Expect = 7e-09
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 5/270 (1%)
Frame = +3
Query: 204 LVQVSPXGLSXLRADKRVNAWKAPGKKSLVSCAVNQS-QVVIALTGGX----LVYFEMDP 368
LVQ+ G+ + +K + PG + + + S QVVIAL +VYFE +
Sbjct: 457 LVQIHAHGIITILNEKLSE--QDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYNT 514
Query: 369 TGQLNEYTEXKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISLDPADCLSPRSM 548
+ E + + S + MALG G+ + +A ++ I++L+
Sbjct: 515 ETKKLAEVERRIIRSNIIAMALGDFENGKAKK--VAYICDNGMANILTLEKESKFLQILE 572
Query: 549 QALPAGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRP 728
+ E+ II F ++ L L IG+ +G + + +L + +G+ P
Sbjct: 573 INITVEGEAESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELM--WCKLIGTDP 630
Query: 729 VKLFKVRVQAAEAVLAVSSRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXIS 908
V + V+ SS Y Y +R TP+SY+ L+ A F + E I I+
Sbjct: 631 VVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGIT 690
Query: 909 SNTLRIWAXKKLGAVFNQTFVPXKYTPRKL 998
++ L + A L F P YTPRK+
Sbjct: 691 NDELTVIAIGSLDDRFTYDEQPLLYTPRKV 720
>UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomyces cerevisiae|Rep: Pre-mRNA-splicing factor
RSE1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1361
Score = 64.1 bits (149), Expect = 7e-09
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Frame = +3
Query: 198 AALVQVSPXGLSXLRADKRVNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQ 377
A L + P G S R ++ W P +V +++Q++I+L+ LVYF++D +
Sbjct: 605 AELRHIVPTGKS--RYSNKLT-WVPPAGIRIVCATSSKTQLIISLSNYELVYFKIDVSSD 661
Query: 378 -LNEYTEXKXLSSAVCCMALGSVAAGEQRAWFLAVGLNDNTVRIISL--DPADCLSPRSM 548
L E T L + +A + Q A LA+ N+ ++I+SL D L+ S+
Sbjct: 662 SLIELTTHPELDTMPSKVA---IVQDTQHADLLAIADNEGMIKIMSLKDQKEDFLTVISL 718
Query: 549 QALPAGAESLCIIEQPFESGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRP 728
Q + + ++ + L+L++GL NGV ++ + V G D + R+LG +P
Sbjct: 719 QLVSEKISDMIMVRD----SSIGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKP 774
Query: 729 VKLFKVR 749
V L +R
Sbjct: 775 VSLSYLR 781
>UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Candida glabrata|Rep: Pre-mRNA-splicing factor RSE1 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1296
Score = 62.9 bits (146), Expect = 2e-08
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Frame = +3
Query: 264 WKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSV 443
W P S++S N SQ+++AL+ +VY +++ L EY L + +AL +
Sbjct: 541 WYPPAGVSILSAVSNFSQLILALSNNEIVYLQLE-NNTLIEYKNRPELPDVITSLAL--L 597
Query: 444 AAGEQRAWFLAVGLNDNTVRIISLDPAD-CLSPRSM--QALPAGAESLCIIEQPFESGAK 614
+++ LAVG +DN V ++SL+ D +S ++ QAL A SL I+ Q G K
Sbjct: 598 NDNTKKSEILAVGTSDNMVNVLSLEIVDEAISFETVVFQALDAIPSSLLILNQ----GHK 653
Query: 615 SALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVK 734
++L+IG+ +G L LD + + + + LG+R +K
Sbjct: 654 -LVNLHIGVEDGSYLVNRLDLRNMSINNILRKQLGTRSIK 692
>UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep:
RepE - Dictyostelium discoideum (Slime mold)
Length = 1139
Score = 62.5 bits (145), Expect = 2e-08
Identities = 68/325 (20%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Frame = +3
Query: 87 SFVXATLVLSX-GAPVASVTASGFLGTPPPLRCHAMGHA-ALVQVSPXGLSXLRAD--KR 254
SF+ T VLS G + G L C + L+Q++ ++ + ++ KR
Sbjct: 438 SFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLIDSNTFKR 497
Query: 255 VNAWKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMAL 434
V+ W + + + NQ Q+V+++ L+YF+++ + + + + L + C+ +
Sbjct: 498 VSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELPHEISCIDI 556
Query: 435 GSV-AAGEQRAWFLAVGL-NDNTVRIISLDPADCLSPRSMQALPAGAESL--CIIEQPFE 602
+ + ++ ++VGL ND T+RI L + + P G E L I+ F+
Sbjct: 557 SPFDSFMDTKSQLVSVGLWNDITLRIFKLPTLE-----EIWKEPLGGEILPRSILMISFD 611
Query: 603 SGAKSALHLNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVS 782
S ++ L +G L + D S L D R LG++P+ L K +++ + A+S
Sbjct: 612 ----SIDYIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAIS 667
Query: 783 SRTWLGYHYQNRFHLTPLSYECLEYAAGFSSXQCTEGIVXISSNTLRIWAXKKLGAVFNQ 962
R + Y + + + ++ + + F+S + ++N+L I ++ + +
Sbjct: 668 DRPTVIYSHNKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIK 727
Query: 963 TFVPXKYTPRKL**ILXQSHYSLXT 1037
T + R++ + S Y++ T
Sbjct: 728 TIPLNEEMGRRIVHLEDHSCYAVIT 752
>UniRef50_Q10570 Cluster: Cleavage and polyadenylation specificity
factor subunit 1; n=29; Deuterostomia|Rep: Cleavage and
polyadenylation specificity factor subunit 1 - Homo
sapiens (Human)
Length = 1443
Score = 36.7 bits (81), Expect = 1.2
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 99 ATLVLSXGAPVASVTASGFLGTPPPLRCHAMG-HAALVQVSPXGLSXLRADKRVNAWKAP 275
+T++L G + + SGF P + +G + +VQVSP G+ L +++
Sbjct: 582 STMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVD 641
Query: 276 GKKSLVSCAVNQSQVVIALTGGXLVYF 356
+V CAV VVI G + F
Sbjct: 642 LGAPIVQCAVADPYVVIMSAEGHVTMF 668
>UniRef50_Q9VN71 Cluster: CG14661-PA; n=4; Schizophora|Rep: CG14661-PA
- Drosophila melanogaster (Fruit fly)
Length = 246
Score = 34.3 bits (75), Expect = 6.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -1
Query: 1026 YNVIVSEFIITFLVCIXKGQMFD*IQLPIFXKPKFSECLK 907
+ +IV+ +I F+ CI G M D IQ+ P+ S+CLK
Sbjct: 3 FQLIVASLLICFVACISAGNMPDYIQVCHRNDPELSKCLK 42
>UniRef50_Q039S0 Cluster: Cell division protein
FtsI/penicillin-binding protein 2; n=2;
Lactobacillus|Rep: Cell division protein
FtsI/penicillin-binding protein 2 - Lactobacillus casei
(strain ATCC 334)
Length = 715
Score = 33.9 bits (74), Expect = 8.3
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +3
Query: 264 WKAPGKKSLVSCAVNQSQVVIALTGGXLVYFEMDPTGQLNEYTEXKXLSSAVCCMALGSV 443
+K P K+ + AVN V L G Y E T N+Y E K +++ + G +
Sbjct: 231 YKLPNAKTNLKTAVNGGTVYTTLDSGLQAYLETLMTDVQNKY-EPKGMTAVLMSAKTGQI 289
Query: 444 AAGEQRAWF 470
A QR F
Sbjct: 290 LAATQRPTF 298
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 952,458,230
Number of Sequences: 1657284
Number of extensions: 17602678
Number of successful extensions: 39726
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 37991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39631
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119538648642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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