Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_F10
(1195 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0377 + 17442942-17443529,17443616-17444158 35 0.15
01_07_0339 + 42848065-42848943,42849308-42849526 35 0.15
05_01_0064 + 454786-455646,456537-456752 34 0.25
12_01_1026 - 10525744-10526018,10528104-10528332 33 0.44
04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016 33 0.44
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058... 32 0.77
12_01_0990 + 10052430-10052895,10053633-10054219 31 1.4
07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733 31 1.4
04_01_0548 + 7103540-7103972,7104081-7104667 31 1.8
02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875... 31 2.4
04_01_0560 - 7183253-7183839,7183935-7184367 30 4.1
09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914 29 5.5
09_06_0301 - 22135076-22135333,22136298-22136304,22136751-221369... 29 9.5
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 29 9.5
>07_03_0377 + 17442942-17443529,17443616-17444158
Length = 376
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 209 KALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEEQ 388
+A F FV+ H RE + + F +LA P G+ F+D T EE
Sbjct: 45 EAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEF 104
Query: 389 QSRL 400
++RL
Sbjct: 105 EARL 108
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 34.7 bits (76), Expect = 0.15
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 LFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEE-QQ 391
LFE F+ + + + ++ FK +L ++ N+ G+N+FAD T +E +
Sbjct: 51 LFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWLGLNEFADLTHDEFKA 110
Query: 392 SRLGLRL-PAKK 424
+ LGL L PA++
Sbjct: 111 AYLGLTLTPARR 122
>05_01_0064 + 454786-455646,456537-456752
Length = 358
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 215 LFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEE-QQ 391
LFE +V + + + ++ FK +L + +N+ G+N+FAD T +E +
Sbjct: 50 LFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFKA 109
Query: 392 SRLGLRLPAKKT 427
+ LGL P ++
Sbjct: 110 TYLGLTPPPTRS 121
>12_01_1026 - 10525744-10526018,10528104-10528332
Length = 167
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEEQ 388
AL++ + H+ E +D D + FK + + N+ T+G+N F D TP+EQ
Sbjct: 98 ALYQRWCSFHDIE-RDRDDMVRRFVYFKDRAHKIIEFNKSGKSYTWGLNIFGDMTPQEQ 155
>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
Length = 336
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 212 ALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEEQQ 391
A E ++ + R KD A+ ++ FK ++A N G+N+FAD T +E +
Sbjct: 35 ARHERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFNAGNHKFWLGVNQFADLTNDEFR 94
Query: 392 S 394
S
Sbjct: 95 S 95
>10_07_0172 +
13804803-13805293,13805423-13805537,13805766-13805831,
13805921-13806009,13806103-13806193,13806312-13806458,
13806575-13806667,13806745-13806846,13806957-13807541,
13808523-13808813,13808866-13808937
Length = 713
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 335 PYTTFGINKFA---DYTPEEQQSRLGLRLPAKKT*VLRLQSIGMLFQTK*MYCDC 490
P T G ++FA D TPE+ G+ P + +RLQ + F+T+ DC
Sbjct: 102 PNATAGASRFALAGDQTPEDSPVIAGVASPKHQAAAVRLQKVYKSFRTRRQLADC 156
>12_01_0990 + 10052430-10052895,10053633-10054219
Length = 350
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 212 ALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTF-GINKFADYTPEE 385
A E ++ H R KD A+ + FK ++A N + G+N+FAD T EE
Sbjct: 42 ARHERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFNAGGKNRYWLGVNQFADLTSEE 100
>07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733
Length = 194
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 209 KALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLN--EXXPYTTFGINKFADYTPE 382
KA FE ++K H R + Y++FK + N+LN + ADYT E
Sbjct: 65 KAKFEDWMKEHGRIYITKKEKAHRYENFKKAMKGINELNIKRGMRSPLAAPTELADYTDE 124
Query: 383 EQQSRLGLRL 412
E + RLG+ +
Sbjct: 125 EVE-RLGITM 133
>04_01_0548 + 7103540-7103972,7104081-7104667
Length = 339
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 212 ALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEE 385
A E ++ + R +D A+ ++ FK ++A N G+N+FAD T +E
Sbjct: 35 ARHERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFNAGNHNFWLGVNQFADLTNDE 92
>02_05_0514 +
29686263-29686728,29687078-29687313,29687435-29687575,
29687685-29687915
Length = 357
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 200 NQAKALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTP 379
N+ LF + H++ + Y+ FK +L + N G+N FAD
Sbjct: 40 NKLVGLFTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNGSYWLGLNHFADIAH 99
Query: 380 EE-QQSRLGLR 409
EE + S LGL+
Sbjct: 100 EEFKASYLGLK 110
>04_01_0560 - 7183253-7183839,7183935-7184367
Length = 339
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 212 ALFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTTFGINKFADYTPEE 385
A E +++ + R KD + ++ FK ++A N G+N+FAD T E
Sbjct: 35 ARHERWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKFWLGVNQFADLTNYE 92
>09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914
Length = 277
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 257 DXADXXLHYQSFKXHLAEXNQLNEXXPYT-TFGINKFADYTPEE 385
D A+ +++FK + ++ N+ T G+NKFAD T EE
Sbjct: 42 DVAETESRFEAFKANARYVSEFNKKEGMTYKLGLNKFADMTLEE 85
>09_06_0301 -
22135076-22135333,22136298-22136304,22136751-22136947,
22137089-22137471,22137624-22138029
Length = 416
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 254 KDXADXXLHYQSFKX---HLAEXNQLNEXXPYTTFGINKFADYTPEE 385
+D +D ++ FK ++ E NQ ++ Y G+NKF+D T EE
Sbjct: 37 RDLSDMESRFEVFKANARYIHEFNQKSKGMSYV-LGLNKFSDLTYEE 82
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +2
Query: 203 QAKALFEIFVKAHNREXKDXADXXLHYQSFKXHLA---EXNQLNEXXPYT-TFGINKFAD 370
+A+ L+ + H + + Y +F+ +L E N + ++ G+N+FAD
Sbjct: 35 EARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFAD 94
Query: 371 YTPEE-QQSRLGLR 409
T EE + + LGLR
Sbjct: 95 LTNEEYRDTYLGLR 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,278,479
Number of Sequences: 37544
Number of extensions: 276513
Number of successful extensions: 913
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3643211076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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