Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_F10
         (1195 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-P...    32   1.8  
BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    30   5.4  
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    30   5.4  
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    30   5.4  

>AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-PA
           protein.
          Length = 79

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 281 YQSFKXHLAEXNQLNEXXPYT-TFGINKFADYTPEEQQSRLGLRLP 415
           Y   K  + E N+  E    T   GIN  AD TPEE   R G ++P
Sbjct: 32  YAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRCGKKVP 77


>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 215 LFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTT-FGINKFADYTPEEQQ 391
           LF  F     R     A+  +  + F+ +L    +LN     +  +GI +FAD T  E +
Sbjct: 307 LFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYK 366

Query: 392 SRLGL 406
            R GL
Sbjct: 367 ERTGL 371


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 215 LFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTT-FGINKFADYTPEEQQ 391
           LF  F     R     A+  +  + F+ +L    +LN     +  +GI +FAD T  E +
Sbjct: 307 LFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYK 366

Query: 392 SRLGL 406
            R GL
Sbjct: 367 ERTGL 371


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 215 LFEIFVKAHNREXKDXADXXLHYQSFKXHLAEXNQLNEXXPYTT-FGINKFADYTPEEQQ 391
           LF  F     R     A+  +  + F+ +L    +LN     +  +GI +FAD T  E +
Sbjct: 168 LFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYK 227

Query: 392 SRLGL 406
            R GL
Sbjct: 228 ERTGL 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,964,859
Number of Sequences: 53049
Number of extensions: 446488
Number of successful extensions: 1575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6315662550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)